Query= MSMg01no075_g01.b1 MSMg01no075_g01.b1 CHROMAT_FILE:
MSMg01no075_g01.b1 PHD_FILE: MSMg01no075_g01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:24:01 2005
(243 letters)
>mm_chr7_103774400_103775041
Length = 642
Score = 416 bits (215), Expect = e-121
Identities = 236/243 (97%), Gaps = 1/243 (0%)
Strand = Plus / Plus
Query: 1 ggtatttgaaatatactttcccaacagatactagaaagggtatatctatcacaggtcaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggtatttgaaatatactttcccaacagatactagaaagggtatatctatcacaggtcaga 260
Query: 61 agaaaaatccacagaaaggccaaagaagtcaggacagcaagctcctgtgagtagtcagta 120
||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 261 agaaaaatccacacaaaggccaaagaggtcaggacagcaagctcctgtgagtagtcagta 320
Query: 121 actgtgagcatagccatggagaccttctacagaggtcggcaagggcagtcctcagcctgg 180
||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 321 actgtgagcgtagccatggagaccttctacagaggtcggcaagggcagtcctgagcctgg 380
Query: 181 tttaacataagcttaatcacagtggctttatcgaagagtgacaactttttcaaaagaagc 240
||||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||||
Sbjct: 381 tttaacataagct-aatcgcagtggctttattgaagagtgacaactttttcaaaagaagc 439
Query: 241 aat 243
|||
Sbjct: 440 aat 442
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 642
Length adjustment: 9
Effective length of query: 234
Effective length of database: 633
Effective search space: 148122
Effective search space used: 148122
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no075_g01.g1 MSMg01no075_g01.g1 CHROMAT_FILE:
MSMg01no075_g01.g1 PHD_FILE: MSMg01no075_g01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:24:02 2005
(457 letters)
>mm_chr7_103926148_103927004
Length = 857
Score = 861 bits (445), Expect = 0.0
Identities = 454/457 (99%)
Strand = Plus / Minus
Query: 1 attctctcatcattctggttagagctatgcagaaatgcccagtacaacacagtttagaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 attctctcatcattctggttagagctatgcagaaatgcccagtacaacacagtttagaat 598
Query: 61 cccaaggctgaacaaggggagggtgtaagtttttaaattatctgctcaccaagaggaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 cccaaggctgaacaaggggagggtgtaagtttttaaattatctgctcaccaagaggaaag 538
Query: 121 gcatcaaagattagaatgtaagggcaaggaagaggaaatgagtccacagcaggaggagtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 gcatcaaagattagaatgtaagggcaaggaagaggaaatgagtccacagcaggaggagtt 478
Query: 181 tgcagttagggccacacccccaccagtgctgaaaggttaaattgtaacagtcgaacccac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 tgcagttagggccacacccccaccagtgctgaaaggttaaattgtaacagtcgaacccac 418
Query: 241 cctccatcctcgccaaccctttccccggtatttaccaatggaacagtcgtgtccagtcca 300
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 cctccaccctcgccaaccctttccccggtatttaccaatggaacagtcgtgtccagtcca 358
Query: 301 gcttgggtcacagttgcaaagtcctgtgtctgggaggaaggttccgcgccctgagcactg 360
|||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 357 gcttgggtcacagttgcaaagtcctgtgtctgggaggaaggttccgtggcctgagcactg 298
Query: 361 gtccaagcatgtggccctgggtgtctcgcagttggtgcctccccatcccacagagcagtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 gtccaagcatgtggccctgggtgtctcgcagttggtgcctccccatcccacagagcagtg 238
Query: 421 gcactcgcctctgacacagacacccctgctggaacat 457
|||||||||||||||||||||||||||||||||||||
Sbjct: 237 gcactcgcctctgacacagacacccctgctggaacat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 457
Length of database: 857
Length adjustment: 10
Effective length of query: 447
Effective length of database: 847
Effective search space: 378609
Effective search space used: 378609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
