Query= MSMg01no075_n06.b1 MSMg01no075_n06.b1 CHROMAT_FILE:
MSMg01no075_n06.b1 PHD_FILE: MSMg01no075_n06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:24:35 2005
(506 letters)
>mm_chr7_63348396_63349301
Length = 906
Score = 963 bits (498), Expect = 0.0
Identities = 504/506 (99%), Gaps = 1/506 (0%)
Strand = Plus / Minus
Query: 1 agacacagtgctgtgcctttgtaatccctgacaagggaggttgagacaaggtcactcact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 862 agacacagtgctgtgcctttgtaatccctgacaagggaggttgagacaaggtcactcact 803
Query: 61 ggccagccagtctgatctacctgaggaattctagacaagtaagaataagattggtggctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 ggccagccagtctgatctacctgaggaattctagacaagtaagaataagattggtggctc 743
Query: 121 ttgagcaagaaaaccccaaactgacctttgttctctacacaaggcagagatggagacaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 ttgagcaagaaaaccccaaactgacctttgttctctacacaaggcagagatggagacaag 683
Query: 181 acagacagacagacacacacacacacaaacacacacacacactttttaaaaaacatactg 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 682 acagacagacagacacacacacacacaaacacacacacacactttttaaaaaacatacag 623
Query: 241 aaacacagagcaagctctctgaaacataacacagtacttcagcatgcctttgaaagctaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 aaacacagagcaagctctctgaaacataacacagtacttcagcatgcctttgaaagctaa 563
Query: 301 aattaaacccctcattttaatatgaatattgcccactttagaaaggaatttttatttatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 aattaaacccctcattttaatatgaatattgcccactttagaaaggaatttttatttatc 503
Query: 361 tttgcagtcccaggtattaaacctattgttaggcaagtactctaagagtctttaacaatc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 tttgcagtcccaggtattaaacctattgttaggcaagtactctaagagtctttaacaatc 443
Query: 421 cccaccccacccgtttgaaatttggagacagggtctccttaagttgcctgggctagtttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 cccaccccacccgtttgaaatttggagacagggtctccttaagttgcctgggctagtttt 383
Query: 481 aaatctttgatcccttctgtctcaac 506
||||||||||| ||||||||||||||
Sbjct: 382 aaatctttgat-ccttctgtctcaac 358
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 506
Length of database: 906
Length adjustment: 10
Effective length of query: 496
Effective length of database: 896
Effective search space: 444416
Effective search space used: 444416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no075_n06.g1 MSMg01no075_n06.g1 CHROMAT_FILE:
MSMg01no075_n06.g1 PHD_FILE: MSMg01no075_n06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:24:35 2005
(244 letters)
>mm_chr7_63234616_63235259
Length = 644
Score = 464 bits (240), Expect = e-135
Identities = 243/244 (99%)
Strand = Plus / Plus
Query: 1 tttgaacacttgtatgaggacaattcccacggagacagttgtaaatccacaggccatgcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgaacacttgtatgaggacaattcccacggagacagttgtaaatccacaggccatgcc 260
Query: 61 caagaagtccaccaggcccacattgctccactcccggaagaggatggctgaagccagtag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caagaagtccaccaggcccacattgctccactcccggaagaggatggctgaagccagtag 320
Query: 121 gaccagcgtggtaaacacaacgtactagatggccccaaatacagaggagtcgaagcactc 180
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 321 gaccagcgtggtaaacacaacgtagtagatggccccaaatacagaggagtcgaagcactc 380
Query: 181 cagggccttgttgatgtacctgaattggacaatgatgctgcagcccaggacagccaggag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagggccttgttgatgtacctgaattggacaatgatgctgcagcccaggacagccaggag 440
Query: 241 cacc 244
||||
Sbjct: 441 cacc 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
