Query= MSMg01no076_f03.b1 MSMg01no076_f03.b1 CHROMAT_FILE:
MSMg01no076_f03.b1 PHD_FILE: MSMg01no076_f03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:25:15 2005
(662 letters)
>mm_chr7_87874315_87875376
Length = 1062
Score = 1123 bits (581), Expect = 0.0
Identities = 633/655 (96%), Gaps = 9/655 (1%)
Strand = Plus / Plus
Query: 17 gaattcacctggacagacag-ctagaatcgaggcctcactgtaggaaagcacagaactag 75
||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 208 gaattcacctggacagaaagtctagaatcgaggcctcactgtaggaaagcacagaactag 267
Query: 76 gagagagaagagagaagcgttcagatttaaaaggtaaaaacacaagtagaagggagtata 135
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 268 gagagagaagagagaagcgttcagatttaaaaggtaaaaacacaagtaggagggagtata 327
Query: 136 gccaagtaagaagagttagcagggaatccgcagcagagcgctgcgctcgctgctattcac 195
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 328 gccaagtaagaagagttagcagggaatccgcagcagagcactgcgctcgctgctattcac 387
Query: 196 ctgaccaccagcagagggagcaatgctccagagaaaagagggctcaggaaaacttcccac 255
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 ctggccaccagcagagggagcaatgctccagagaaaagagggctcaggaaaacttcccac 447
Query: 256 tacctatacttagtgtacacagtgcctttaaagatgaagatgaacagaaactatctgctt 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 tacctatacttagtgtacacagtgcctttaaagatgaagatgaacagaaactatctgctt 507
Query: 316 agaaggcaccgtcttctagttacagctgctcgtgaggctcacagtggagg--------gc 367
|||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 508 agaaggcaccgtcttctagttacagctgctcgtgaggctcacagtggaggacactcaggc 567
Query: 368 actttctgctggtctgtggtcactgggcatctgacagcagagggcaggcacccggcagct 427
|||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 568 acttcctgctggtctgtggtcactgggcatctgacagcagagggcaggcacccggtagct 627
Query: 428 ctcagagtcttaccttcagcagctcgtcctcaccagcgtcagggaacttctcgtgaagtg 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 628 ctcagagtcttaccttcagcagctcgtcctcaccagcgtcagggaacttctcgtgcaggg 687
Query: 488 aatccttcaggactttggcaatgaatcgcatcccataactgtgggacggacaaaatggag 547
||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 688 aatccttcaggactttggcaatgaagcgcatcccataactgtgggatggacaaaatggag 747
Query: 548 cgaggtcaggccacagagtatgccaccagccaggctttatttggggtcacaactgatggc 607
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 748 tgaggtcaggccacagagtatgccaccagccaggctttatttggagtcacaactgatggc 807
Query: 608 actcacgggattttgtccacagagctaacgatggctgagaggaacttgtctgtca 662
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 808 actcacgggattttgtccacagagctgacgatggctgagaggaacttgtctgtca 862
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 662
Length of database: 1062
Length adjustment: 10
Effective length of query: 652
Effective length of database: 1052
Effective search space: 685904
Effective search space used: 685904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no076_f03.g1 MSMg01no076_f03.g1 CHROMAT_FILE:
MSMg01no076_f03.g1 PHD_FILE: MSMg01no076_f03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:25:15 2005
(526 letters)
>mm_chr7_88024918_88025843
Length = 926
Score = 716 bits (370), Expect = 0.0
Identities = 373/374 (99%)
Strand = Plus / Minus
Query: 1 catagaattccatggagaggccgcctcactatgacttgactcaactgtatagtaaaagca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 catagaattccatggagaggccgcctcactatgacttgactcaactgtatagtaaaagca 315
Query: 61 gatctgtacaacacaagtctgtttagaaccaggtctgagaagcccccccaggctctacca 120
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 gatctgtgcaacacaagtctgtttagaaccaggtctgagaagcccccccaggctctacca 255
Query: 121 caccataaacttaaggcaggtacaaggtggcacatctggttatcgatgctcagttgtttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 caccataaacttaaggcaggtacaaggtggcacatctggttatcgatgctcagttgtttc 195
Query: 181 tggatctgggtgctgcttgtttaagtgtgtgcagcttgtgaaactaaggcaagctgcaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 tggatctgggtgctgcttgtttaagtgtgtgcagcttgtgaaactaaggcaagctgcaca 135
Query: 241 cttttatgtatttatctgtcatatctcagtaagatctttaaagcaaggggactgtctcag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 cttttatgtatttatctgtcatatctcagtaagatctttaaagcaaggggactgtctcag 75
Query: 301 gctaaagttatagagtggattaacgtgtgaaaggagatggcatggtggcatataaaactg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 gctaaagttatagagtggattaacgtgtgaaaggagatggcatggtggcatataaaactg 15
Query: 361 cagtgccagtacct 374
||||||||||||||
Sbjct: 14 cagtgccagtacct 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 526
Length of database: 926
Length adjustment: 10
Effective length of query: 516
Effective length of database: 916
Effective search space: 472656
Effective search space used: 472656
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
