Query= MSMg01no078_k21.b1 MSMg01no078_k21.b1 CHROMAT_FILE:
MSMg01no078_k21.b1 PHD_FILE: MSMg01no078_k21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:27:05 2005
(414 letters)
>mm_chr7_112966992_112967806
Length = 815
Score = 735 bits (380), Expect = 0.0
Identities = 404/414 (97%), Gaps = 5/414 (1%)
Strand = Plus / Plus
Query: 4 ggaattctttatcttggt---ccactcattaccaccatctggtggttacataaggtaact 60
|||||||||||||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct: 204 ggaattctttatcttggtaag--actcattaccaccatctggtggtcacataaggtaact 261
Query: 61 ttagcgttgcttcagctggaatctgaatgaactaaggtctcagaagttggaagcctataa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ttagcgttgcttcagctggaatctgaatgaactaaggtctcagaagttggaagcctataa 321
Query: 121 gaacaattgtcataactagattatgagatacataagtgtagtaagaattttgaaattttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 gaacaattgtcataactagattatgagatacataagtgtagtaagaattttgaaattttg 381
Query: 181 gtttctttaaaaaacacagaaatattataagaatgtgtttttgttttaatcccaggtgtg 240
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 382 gtttctttaaaaaacacagaaatatcataagaatgtgtttttgttttaatcccaggtgtg 441
Query: 241 gcatatggggctgctttggactgactgcaacaactgcctgatttgccttgtgctcttaca 300
||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||
Sbjct: 442 gcatatggggctgctttggactgactgcaacgactgcctcatttgccttgtgctcttaca 501
Query: 301 gggatatgatttttgccagctgcagatagtttctgtgattgtgtgacatttggaattctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 gggatatgatttttgccagctgcagatagtttctgtgattgtgtgacatttggaattctg 561
Query: 361 gggactttttagagcgtgtatgagtgctagggtccggaaaagggtgatgggttg 414
|||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 562 gggactttttagagtgtgtatgagtgctagggtccggaaaagggtgatgggttg 615
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 414
Length of database: 815
Length adjustment: 9
Effective length of query: 405
Effective length of database: 806
Effective search space: 326430
Effective search space used: 326430
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no078_k21.g1 MSMg01no078_k21.g1 CHROMAT_FILE:
MSMg01no078_k21.g1 PHD_FILE: MSMg01no078_k21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:27:05 2005
(596 letters)
>mm_chr7_113378170_113379166
Length = 997
Score = 998 bits (516), Expect = 0.0
Identities = 567/584 (97%), Gaps = 1/584 (0%)
Strand = Plus / Minus
Query: 1 tgcctgttgtgaattc-aatgtagtcttctaagatgatggtttctgtgtcaatgacatag 59
|||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 584 tgcctgttgtgaattcaaatgtaggcttctaagatgatggtttctgtgtcaatgacatag 525
Query: 60 cattcagatggatggagttctttctttagggtctaggatctctaaagcagaagaggacag 119
| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 524 ccttcagctggatggagttctttctttagggtctaggatttctaaagcagaagaggacag 465
Query: 120 agggacctctttaattttgaatcataaaagttgggcatgttgggaggggcctagagagga 179
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 aaggacctctttaattttgaatcataaaagttgggcatgttgggaggggcctagagagga 405
Query: 180 ccatgaatatcttggggtccaaatacaaacttaactcattagttctaaaaaggagagaag 239
|||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 404 ccatgaatatcttgaggtccaaatacaaacttaactcattagttctaaaaaagagagaag 345
Query: 240 gttgcatttggtctggaagcaggggaaatatgtcctgctttatagtttcacagctttgat 299
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 344 gttgcatttggtctggaagcaagggaaatatgtcctgctttatagtttcacagctttgat 285
Query: 300 gtatgttggatgaagaaagacttgaagtaaatctatggtaagctcatgctgaaggtatca 359
||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 284 ctatgttggatgaagagagacttgaagtaaatctatggtaagttcatgctgaaggtatcg 225
Query: 360 gatccttacaagggagatgcctgatatgatagttaaccttagttgtctacttgacttgat 419
|||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||
Sbjct: 224 gatctttacaagggagatgcctgatatgatagttaatcttagttgtctacttgactggat 165
Query: 420 ctgtatcacctaaaatgcaagctatggagcacacatgttggactctgtggtcagattatt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 ctgtatcacctaaaatgcaagctatggagcacacatgttggactctgtggtcagattatt 105
Query: 480 tgaagattgaaggcccacccaaaacatggtgaccacaacaagataaaagagagatagagg 539
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 104 tgaagattgaaggcccacccaaaacatggtcaccacaacaagataaaagagagatagagg 45
Query: 540 gtttctgtctgtgcccggagctgatcctctgtctcagggctcca 583
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44 gtttctgtctgtgcccggagctgatcctctgtctcagggctcca 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 596
Length of database: 997
Length adjustment: 10
Effective length of query: 586
Effective length of database: 987
Effective search space: 578382
Effective search space used: 578382
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
