Query= MSMg01no079_j20.b1 MSMg01no079_j20.b1 CHROMAT_FILE:
MSMg01no079_j20.b1 PHD_FILE: MSMg01no079_j20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:17 2005
(650 letters)
>mm_chr7_63348357_63349406
Length = 1050
Score = 1232 bits (637), Expect = 0.0
Identities = 643/645 (99%), Gaps = 1/645 (0%)
Strand = Plus / Minus
Query: 7 gaattcaattcccggaccccatgt-aaaaatgtcagacacagtgctgtgcctttgtaatc 65
|||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 935 gaattcaattcccggaacccatgtaaaaaatgtcagacacagtgctgtgcctttgtaatc 876
Query: 66 cctgacaagggaggttgagacaaggtcactcactggccagccagtctgatctacctgagg 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 875 cctgacaagggaggttgagacaaggtcactcactggccagccagtctgatctacctgagg 816
Query: 126 aattctagacaagtaagaataagattggtggctcttgagcaagaaaaccccaaactgacc 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 815 aattctagacaagtaagaataagattggtggctcttgagcaagaaaaccccaaactgacc 756
Query: 186 tttgttctctacacaaggcagagatggagacaagacagacagacagacacacacacacac 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 tttgttctctacacaaggcagagatggagacaagacagacagacagacacacacacacac 696
Query: 246 aaacacacacacacactttttaaaaaacatacagaaacacagagcaagctctctgaaaca 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 aaacacacacacacactttttaaaaaacatacagaaacacagagcaagctctctgaaaca 636
Query: 306 taacacagtacttcagcatgcctttgaaagctaaaattaaacccctcattttaatatgaa 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 taacacagtacttcagcatgcctttgaaagctaaaattaaacccctcattttaatatgaa 576
Query: 366 tattgcccactttagaaaggaatttttatttatctttgcagtcccaggtattaaacctat 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 tattgcccactttagaaaggaatttttatttatctttgcagtcccaggtattaaacctat 516
Query: 426 tgttaggcaagtactctaagagtctttaacaatccccaccccacccgtttgaaatttgga 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 tgttaggcaagtactctaagagtctttaacaatccccaccccacccgtttgaaatttgga 456
Query: 486 gacagggtctccttaagttgcctgggctagttttaaatctttgatccttctgtctcaacc 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 gacagggtctccttaagttgcctgggctagttttaaatctttgatccttctgtctcaacc 396
Query: 546 taccaagtagctaaagattccaggtctgtaccacctggtctggctgtcaattagtatcat 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 taccaagtagctaaagattccaggtctgtaccacctggtctggctgtcaattagtatcat 336
Query: 606 atttctaactcttctaaaaacagtctcattatcacttacgagtgt 650
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 atttctaactcttctaaaaacagtctcattatcacttacgagtgt 291
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 650
Length of database: 1050
Length adjustment: 10
Effective length of query: 640
Effective length of database: 1040
Effective search space: 665600
Effective search space used: 665600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no079_j20.g1 MSMg01no079_j20.g1 CHROMAT_FILE:
MSMg01no079_j20.g1 PHD_FILE: MSMg01no079_j20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:17 2005
(614 letters)
>mm_chr7_63234616_63235629
Length = 1014
Score = 1180 bits (610), Expect = 0.0
Identities = 613/614 (99%)
Strand = Plus / Plus
Query: 1 tttgaacacttgtatgaggacaattcccacggagacagttgtaaatccacaggccatgcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgaacacttgtatgaggacaattcccacggagacagttgtaaatccacaggccatgcc 260
Query: 61 caagaagtccaccaggcccacattgctccactcccggaagaggatggctgaagccagtag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caagaagtccaccaggcccacattgctccactcccggaagaggatggctgaagccagtag 320
Query: 121 gaccagcgtggtaaacacaacgtagtagatggccccaaatacagaggagtcgaagcactc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaccagcgtggtaaacacaacgtagtagatggccccaaatacagaggagtcgaagcactc 380
Query: 181 cagggccttgttgatgtacctgaattggacaatgatgctgcagcccaggacagccaggag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagggccttgttgatgtacctgaattggacaatgatgctgcagcccaggacagccaggag 440
Query: 241 caccaggcacaggcagagggctctctgactggatggattgttgtgcaagatgtcttgggc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caccaggcacaggcagagggctctctgactggatggattgttgtgcaagatgtcttgggc 500
Query: 301 tgccagcccaatgcccttggtggaaggcacagtgaaactccccagcaaggagcagatgct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgccagcccaatgcccttggtggaaggcacagtgaaactccccagcaaggagcagatgct 560
Query: 361 gatgtagaccatgatgttggtgggcccgtgggctggtgcgatccagaagatcaacagcag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gatgtagaccatgatgttggtgggcccgtgggctggtgcgatccagaagatcaacagcag 620
Query: 421 cagcatgagcaacacgatgcacaggtagcccacaaacactgcaagacagatggcacacag 480
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cagcatgagcagcacgatgcacaggtagcccacaaacactgcaagacagatggcacacag 680
Query: 481 tgaccagggaggccatccccccaaacaccatcaagaggtcagagctgaaccagggcccga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgaccagggaggccatccccccaaacaccatcaagaggtcagagctgaaccagggcccga 740
Query: 541 tccctttccagccaccccttcaaccagggggagagagacctaagggaggacaggtaacca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tccctttccagccaccccttcaaccagggggagagagacctaagggaggacaggtaacca 800
Query: 601 accactcaatagct 614
||||||||||||||
Sbjct: 801 accactcaatagct 814
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 614
Length of database: 1014
Length adjustment: 10
Effective length of query: 604
Effective length of database: 1004
Effective search space: 606416
Effective search space used: 606416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
