Query= MSMg01no080_c06.b1 MSMg01no080_c06.b1 CHROMAT_FILE:
MSMg01no080_c06.b1 PHD_FILE: MSMg01no080_c06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:57 2005
(279 letters)
>mm_chr7_146370185_146370863
Length = 679
Score = 485 bits (251), Expect = e-142
Identities = 269/275 (97%), Gaps = 1/275 (0%)
Strand = Plus / Plus
Query: 6 gaattctcaatatatccag-aaaactgggccagggagatgagtcagcaggtaaaggcact 64
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctcaatataaaaagtaaaactgggccagggagatgagtcagcaggtaaaggcact 264
Query: 65 gactgccaagcctgacagcctgagtttaatccctggaagtcacatgtcagaaaggaaccg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gactgccaagcctgacagcctgagtttaatccctggaagtcacatgtcagaaaggaaccg 324
Query: 125 acactctcaagttgttttcagacttccacatgtgtgccacaatctgacagccccaagtct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 acactctcaagttgttttcagacttccacatgtgtgccacaatctgacagccccaagtct 384
Query: 185 gctgtctctcactctccatttccatccaagcgagccagtcctggacacctgttgtgacat 244
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 385 gctgtctctcactctccatttccatccaagtgagccagtcctggacacctgttgtgacat 444
Query: 245 acctatgacattcctcgaaattcatcctaaggtga 279
| |||||||||||||||||||||||||||||||||
Sbjct: 445 agctatgacattcctcgaaattcatcctaaggtga 479
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 279
Length of database: 679
Length adjustment: 9
Effective length of query: 270
Effective length of database: 670
Effective search space: 180900
Effective search space used: 180900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no080_c06.g1 MSMg01no080_c06.g1 CHROMAT_FILE:
MSMg01no080_c06.g1 PHD_FILE: MSMg01no080_c06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:57 2005
(450 letters)
>mm_chr7_146499552_146500401
Length = 850
Score = 847 bits (438), Expect = 0.0
Identities = 447/450 (99%)
Strand = Plus / Minus
Query: 1 tagagagcagccagggccaaagtgacagagtcaacaaaggctgtgagatggcaaaactgt 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 650 tagagagcagccagggccaaagtgacagagtcaacaaaggctgtgagacggcaaaactgt 591
Query: 61 ggtccctgatcacagtaacctccaggacctctcttgcatgactttttctgggtcaccaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 ggtccctgatcacagtaacctccaggacctctcttgcatgactttttctgggtcaccaat 531
Query: 121 acaccaaaggaaaagattgtatccaagtcccactcagtgaagtaatgactattagggtaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 acaccaaaggaaaagattgtatccaagtcccactcagtgaagtaatgactattagggtaa 471
Query: 181 tttaccggagcactggcaactcaaaagcagctgtaccactgagaaattccatgggcagtt 240
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 tttacctgagcactggcaactcaaaagcagctgtaccactgagaaattccatgggcagtt 411
Query: 241 aacaggcagctatgcccctagaagtgccccaattcatctaatttagtagccaccagggta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 aacaggcagctatgcccctagaagtgccccaattcatctaatttagtagccaccagggta 351
Query: 301 gaggagcctgcgtagtggaggtcacgtggttctcatgcgctctgcgagtattgtaaggct 360
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 350 gaggagcctgcgtagtggaggtcacgtggttctcatgcgctctgtgagtattgtaaggct 291
Query: 361 tgtaagtctcttgacctcctccccttccaggagggttaactctctccttcaggtttcatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 tgtaagtctcttgacctcctccccttccaggagggttaactctctccttcaggtttcatg 231
Query: 421 taggtcatcacagttgctcttcttcaagac 450
||||||||||||||||||||||||||||||
Sbjct: 230 taggtcatcacagttgctcttcttcaagac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 450
Length of database: 850
Length adjustment: 10
Effective length of query: 440
Effective length of database: 840
Effective search space: 369600
Effective search space used: 369600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
