Query= MSMg01no081_o09.b1 MSMg01no081_o09.b1 CHROMAT_FILE:
MSMg01no081_o09.b1 PHD_FILE: MSMg01no081_o09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:31:15 2005
(263 letters)
>mm_chr7_4470654_4471316
Length = 663
Score = 377 bits (195), Expect = e-109
Identities = 204/207 (98%)
Strand = Plus / Plus
Query: 57 ctctctctctctctctctctctctctggaccttatgccactcaggccttccccagcatct 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 ctctctctctctctctctctctctctggaccttatgccactcaggccttccccagcatct 316
Query: 117 tccttccttctcaccctagcccacactcaccttctcaatgtcctccttcttcacctgctt 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 tccttccttctcaccctagcccacactcaccttctcaatgtcctccttcttcacctgctt 376
Query: 177 gaggtgggccctcaggtccaaggattccttggcccgggtccccagcagcgcctgcatcat 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 gaggtgggccctcaggtccaaggattccttggcccgggtccccagcagcgcctgcatcat 436
Query: 237 ggtatctgcatatatcctcactcttcg 263
|| ||||||| | ||||||||||||||
Sbjct: 437 ggcatctgcagagatcctcactcttcg 463
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 263
Length of database: 663
Length adjustment: 9
Effective length of query: 254
Effective length of database: 654
Effective search space: 166116
Effective search space used: 166116
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no081_o09.g1 MSMg01no081_o09.g1 CHROMAT_FILE:
MSMg01no081_o09.g1 PHD_FILE: MSMg01no081_o09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:31:15 2005
(287 letters)
>mm_chr7_4667896_4668582
Length = 687
Score = 522 bits (270), Expect = e-153
Identities = 282/286 (98%)
Strand = Plus / Minus
Query: 1 gtgtcaggtacatactattttcaaggcaagcctgggctatatgacagcctgtcacaaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 gtgtcaggtacatactattttcaaggcaagcctgggctatatgacagcctgtcacaaaat 490
Query: 61 aaaccccaacaaagggaaaaagattagccaagcatgcagagggagtagaaatggtacttt 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 489 aaaccccaacaaagggaaaaagattagccaagcatgcagagggagtagaaatggcacttt 430
Query: 121 tcttggaagagtcattccggtatcagcaaggatccagaatggaaaatgggtttggagttc 180
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 429 tcttggaagagtcattccggtatcggcaaggatccagaatggaaaatgggtttggagttc 370
Query: 181 tccagcactaatcagagtcattatagaggagagaggaacagatgggagggagcaaggttt 240
||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 369 tccagcactaatcggagtcattagagaggagagaggaacagatgggagggagcaaggttt 310
Query: 241 ggagggtaacgggataacagctacaattcctttgaagggatgtcgg 286
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 ggagggtaacgggataacagctacaattcctttgaagggatgtcgg 264
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
