Query= MSMg01no082_a16.b1 MSMg01no082_a16.b1 CHROMAT_FILE:
MSMg01no082_a16.b1 PHD_FILE: MSMg01no082_a16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:31:26 2005
(392 letters)
>mm_chr7_137667953_137668744
Length = 792
Score = 679 bits (351), Expect = 0.0
Identities = 369/379 (97%), Gaps = 7/379 (1%)
Strand = Plus / Plus
Query: 7 gaattctcttcataacccatagaaacaggaatgaattattctgagtattctgagaaaaac 66
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattctcttcagaaaccatagaaacaggaatgaattattctgagtattctgagaaaaac 266
Query: 67 aaaacctagagttctatatcctgagaacttacccttcaaacgtgaaagaaaaatccagtt 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 aaaacctagagttctatatcctgagaacttacccttcaaacgtgaaagaaaaatccagtt 326
Query: 127 tcccatgaaggaatgtgtctgcctgctttgaataaactgtatattcttcaggggacggaa 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 327 tcccatgaaggaatgtgtctgcctgctttgaataaactgtatattcttcaggggaaggaa 386
Query: 187 tcaatgatgggtaattaggatgttcttttttttttttttttttttttgagacagggtttc 246
|||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 387 tcaatgatgggtaattaggatgttcttttttttttttttt-------gagacagggtttc 439
Query: 247 tctgtgtagccctggctgtcctgcaacttactttgtagaccaggctggcctcgaactcag 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tctgtgtagccctggctgtcctgcaacttactttgtagaccaggctggcctcgaactcag 499
Query: 307 aaatctgcctgcctctgcctcccaagtgctgggattaaaggtgtgcgccatcatgcccag 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 aaatctgcctgcctctgcctcccaagtgctgggattaaaggtgtgcgccatcatgcccag 559
Query: 367 ctttttttttttttttttt 385
|||||||||||||||||||
Sbjct: 560 ctttttttttttttttttt 578
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 48
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 392
Length of database: 792
Length adjustment: 9
Effective length of query: 383
Effective length of database: 783
Effective search space: 299889
Effective search space used: 299889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no082_a16.g1 MSMg01no082_a16.g1 CHROMAT_FILE:
MSMg01no082_a16.g1 PHD_FILE: MSMg01no082_a16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:31:26 2005
(640 letters)
>mm_chr7_137794076_137795115
Length = 1040
Score = 1207 bits (624), Expect = 0.0
Identities = 636/640 (99%)
Strand = Plus / Minus
Query: 1 caggccagcctggtctattcaataaaatccctaagaaaggaatggcacttatctcaccat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 caggccagcctggtctattcaataaaatccctaagaaaggaatggcacttatctcaccat 781
Query: 61 gggtcatggctaagcaggaggtaggtatcatatgtatacaggaaagtggcccccaaaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 gggtcatggctaagcaggaggtaggtatcatatgtatacaggaaagtggcccccaaaaaa 721
Query: 121 ctatatttatagctgtctccctagatctttctggctgcctctttgggcaggccagaacca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 ctatatttatagctgtctccctagatctttctggctgcctctttgggcaggccagaacca 661
Query: 181 acacccttctaacttgcttgagctgagaacaggcacccatcccaggagcaatgagctgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 acacccttctaacttgcttgagctgagaacaggcacccatcccaggagcaatgagctgaa 601
Query: 241 ggccgggcagaagcctccagtatttttatgtagacaggagacaactttgaaatgaacaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 ggccgggcagaagcctccagtatttttatgtagacaggagacaactttgaaatgaacaaa 541
Query: 301 caaattaagaatttatcagaatcacaggttttctctggttctaaaaccacaccagcaata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 caaattaagaatttatcagaatcacaggttttctctggttctaaaaccacaccagcaata 481
Query: 361 aaattacttggttttctccttgtcacacaagaaggtcccatccttaagtgaagtaaatac 420
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 480 aaattacttggttttctccttgtcacacaagaaggttccatccttaagtgaagtaaatac 421
Query: 421 ttctccgagagacgagagggcctattccctgacccagcaaggagccgctggggaaatgtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 ttctccgagagacgagagggcctattccctgacccagcaaggagccgctggggaaatgtt 361
Query: 481 ctacggaactctgagtgatgagctcagagaaatatgaggcagggtcttgtcagacttcaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 ctacggaactctgagtgatgagctcagagaaatatgaggcagggtcttgtcagacttcaa 301
Query: 541 ggacagactttgagcaggcagatcacaggacatcctgggaacagagcctgagatgcagct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 ggacagactttgagcaggcagatcacaggacatcctgggaacagagcctgagatgcagct 241
Query: 601 ttggctaatagccctgacttctcgcttgggcctacgctgt 640
|||||||| |||||||||||||| |||||||||| |||||
Sbjct: 240 ttggctaaaagccctgacttctcacttgggcctatgctgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 640
Length of database: 1040
Length adjustment: 10
Effective length of query: 630
Effective length of database: 1030
Effective search space: 648900
Effective search space used: 648900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
