Query= MSMg01no082_f20.b1 MSMg01no082_f20.b1 CHROMAT_FILE:
MSMg01no082_f20.b1 PHD_FILE: MSMg01no082_f20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:31:49 2005
(421 letters)
>mm_chr7_56210067_56210887
Length = 821
Score = 696 bits (360), Expect = 0.0
Identities = 388/402 (96%), Gaps = 8/402 (1%)
Strand = Plus / Minus
Query: 19 gggttagggggctatcaccacaaccccttgcctgagcaactatgtaggcatggaggtgca 78
||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 661 gggttagggggctatcaccacaaccccttgcctgagcaact--------atggaggtgca 610
Query: 79 cctgagaggaagcttgtcaggactgtcctctggggagtcaactcgaagaactggtggatt 138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 cctgagaggaagcttgtcaggactgtcctctggggagtcaactcgaagaactggtggatt 550
Query: 139 tgttccaagctttcaaaaacatcagttcagtgtgatgacattaaattgcaattatagatc 198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 tgttccaagctttcaaaaacatcagttcagtgtgatgacattaaattgcaattatagatc 490
Query: 199 ttttggaatcagctggaatttcactctcgaaagaataaatgctagataatggtgatgata 258
||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 489 ttttggaatcagctggaatttcactctcgaaagaataaatgctagataatggtgacgcta 430
Query: 259 gagattagctgtgagttaaagccaacaccctacctccattgtcaccaggaagcctacaat 318
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 gagattagctgtgagggaaagccaacaccctacctccattgtcaccaggaagcctacaat 370
Query: 319 acccgtctttgaatgccgcccttccacagtttgctgaaggtgactaagtgcacgtagttt 378
|||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 369 acccgtctttgaataccgcccttccacagtttgctgaaggtgactaagtgcatgtagttt 310
Query: 379 ctctctgagttccaacatcttcagcaatggtgtgtacagaca 420
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 ctctctgagttccaacatcttcagcaatggtgtgtacagaca 268
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 421
Length of database: 821
Length adjustment: 9
Effective length of query: 412
Effective length of database: 812
Effective search space: 334544
Effective search space used: 334544
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no082_f20.g1 MSMg01no082_f20.g1 CHROMAT_FILE:
MSMg01no082_f20.g1 PHD_FILE: MSMg01no082_f20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:31:49 2005
(319 letters)
>mm_chr7_56030523_56031241
Length = 719
Score = 617 bits (319), Expect = 0.0
Identities = 319/319 (100%)
Strand = Plus / Plus
Query: 1 ttcatgacgggccaccataagctatataataaaatgaaccctttccttatattttcttta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcatgacgggccaccataagctatataataaaatgaaccctttccttatattttcttta 260
Query: 61 tgtttatggtggttatcccaacagagaagcaaatgaatacactagcctgccaagaagact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtttatggtggttatcccaacagagaagcaaatgaatacactagcctgccaagaagact 320
Query: 121 ctctcggccctggggttattcatctcaaagtgaagtctttgcaatattattgcaataatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctctcggccctggggttattcatctcaaagtgaagtctttgcaatattattgcaataatt 380
Query: 181 caataataaagaggcacccagaaccctaaagggggacataaagaaacctgaggcttcctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caataataaagaggcacccagaaccctaaagggggacataaagaaacctgaggcttcctg 440
Query: 241 ggaagaaaggtaacctagagaggaagttccactttcctggtagtgacagagtatgggggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggaagaaaggtaacctagagaggaagttccactttcctggtagtgacagagtatgggggt 500
Query: 301 ggaaataggagaagtgggt 319
|||||||||||||||||||
Sbjct: 501 ggaaataggagaagtgggt 519
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space: 220100
Effective search space used: 220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
