Query= MSMg01no083_m07.b1 MSMg01no083_m07.b1 CHROMAT_FILE:
MSMg01no083_m07.b1 PHD_FILE: MSMg01no083_m07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:33:35 2005
(329 letters)
>mm_chr7_47853675_47854405
Length = 731
Score = 586 bits (303), Expect = e-172
Identities = 324/331 (97%), Gaps = 2/331 (0%)
Strand = Plus / Minus
Query: 1 caggaaag-aatgtgtttaatacacttcaagaaatagaaaaaattacaatacacataata 59
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 caggaaagaaatgtgtttaatacacttcaagaaatagaaaaaattacaatacacataata 333
Query: 60 gatggaagactacagagcgagatgaattttattaacaagaatattttagaatgc-aaaaa 118
|||||||||||||||| ||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 332 gatggaagactacagaacgagatggattttattaacaagaatattttagaatgcaaaaaa 273
Query: 119 aaaaacaagtattggcataaaacagaatagcttgatctgagaaaattatccagaatataa 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 aaaaacaagtattggcataaaacagaatagcttgatctgagaaaattatccagaatataa 213
Query: 179 ttatattctacaaggctgtaggacatgtataagggggagaggggccttgctggagaaagt 238
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 212 ttatattctacaaggctgtaggacatttataagggggagaggggccttgctggagaaagt 153
Query: 239 gactcgctagaggtctttgaagctttctagccccatcccactttctgttcattctctgct 298
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 gactcactagaggtctttgaagctttctagccccatcccactttctgttcattctctgca 93
Query: 299 tcctagatgtagatgcaatgtgataatcagg 329
|||||||||||||||||||||||||||||||
Sbjct: 92 tcctagatgtagatgcaatgtgataatcagg 62
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 329
Length of database: 731
Length adjustment: 9
Effective length of query: 320
Effective length of database: 722
Effective search space: 231040
Effective search space used: 231040
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no083_m07.g1 MSMg01no083_m07.g1 CHROMAT_FILE:
MSMg01no083_m07.g1 PHD_FILE: MSMg01no083_m07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:33:36 2005
(353 letters)
>mm_chr7_47767798_47768552
Length = 755
Score = 611 bits (316), Expect = e-179
Identities = 345/356 (96%), Gaps = 4/356 (1%)
Strand = Plus / Plus
Query: 1 acccctttgtctcctgtttctgtagatagtaaaggaagccctgagtgagtgaagttctga 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 201 acccctttgtctcctgtttctgtagacagtaaaggaagccctgagtgagtgaagttctga 260
Query: 61 gtaaatgtgtattgttggcatggagagagccatgccgggactctgaggtcttggtcccac 120
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 261 gtaaatgtgtattgttggcatggagagagccatgccaggactctgaggtcttggtcccac 320
Query: 121 tggggactggcaaagctgtccgccatatgagtaaggtttggaaaggcaatgcttccctct 180
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tggggattggcaaagctgtccgccatatgagtaaggtttggaaaggcaatgcttccctct 380
Query: 181 gaagccaaatacaagtgtttatgcatgactgagcagggtgtgcaaagaatagaaactaca 240
||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 381 gaagccaaataca-gtgtttatgcatgactgagcagggtgtgcaaaggatagaaactaca 439
Query: 241 gcttcctccttccagatgtttatagcctgatactgttgcttataaaacctcctacccaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gcttcctccttccagatgtttatagcctgatactgttgcttataaaacctcctacccaga 499
Query: 301 ctggtgaac---ttctcctgggctgttcgtaataatcacactgacgctctagttgg 353
||||||||| ||||||||||||||| |||||||||||||||| | |||||||||
Sbjct: 500 ctggtgaacctcttctcctgggctgtttgtaataatcacactgaggttctagttgg 555
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 353
Length of database: 755
Length adjustment: 9
Effective length of query: 344
Effective length of database: 746
Effective search space: 256624
Effective search space used: 256624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
