Query= MSMg01no083_m15.b1 MSMg01no083_m15.b1 CHROMAT_FILE:
MSMg01no083_m15.b1 PHD_FILE: MSMg01no083_m15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:33:37 2005
(612 letters)
>mm_chr7_98824117_98825130
Length = 1014
Score = 1064 bits (550), Expect = 0.0
Identities = 599/626 (95%), Gaps = 19/626 (3%)
Strand = Plus / Plus
Query: 5 gaattctgtaacacctgtctccagtattagtgctggctttgcaaagaaacatgcccatca 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 gaattctgtaacacatgtctccagtattagtgctggctttgcaaagaaacatgcccatca 249
Query: 65 ttgtttatatggcagttcttcctgcttcaggctgaatcaggagacacaacaaaaccatgg 124
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 ttgtttatctggcagttcttcctgcttcaggctgaatcaggagacacaacaaaaccatgg 309
Query: 125 gagcttggacttcataggtttttttt---------------cccaatttctccaccattc 169
|||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 310 gagcttggacttcataggtttttttttttttttgtatttttcccaatttctccaccattc 369
Query: 170 atagtttattcaactattatatactaaatgcctatgatctagccctgtgtcatagcttgt 229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 atagtttattcaactattatatactaaatgcctatgatctagccctgtgtcatagcttgt 429
Query: 230 ggatattctaggaaacaaagtaggcccctgctgcattagagcccatattttaccacagtc 289
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 430 ggatattctaggaaacaaagtaggcccctactgcattagagcccatattttaccacagtc 489
Query: 290 taggtatttagtaattatagcatgacctgagagttccaaggatgttgcagttactaaacc 349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 taggtatttagtaattatagcatgacctgagagttccaaggatgttgcagttactaaacc 549
Query: 350 atgcatcttggctgcatggcacctgcagaagagtcaggcagcaagacacccattagaaaa 409
||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 550 atgcatcttggctgcatgggatctgcagaagagtcaggcagcaagacacccattagaaaa 609
Query: 410 gaagctacttctcttaaaaactatcatttccatttcgtaagatgtagatttaaaatagag 469
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 610 gaagctacttctcttaaaaactatcatttccattttgtaagatgtagatttaaaatagag 669
Query: 470 cctacttccttggactatggtaaggtttgcacatataattcatgtaccactgggtttttt 529
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 cctacttccttgggctatggtaaggtttgcacatataattcatgtaccactgggttttt- 728
Query: 530 acctagcaaaggctaaatgaatattgttgatgagaaaaaaaa---cacaattagtgcagc 586
|||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||
Sbjct: 729 acctagcaaaggctaaatgaatattgttgatgggaaaaaaaaaaccacaattagtgcagc 788
Query: 587 tattataatcttatttcaccttgttc 612
||||||||||||||||||||||||||
Sbjct: 789 tattataatcttatttcaccttgttc 814
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 612
Length of database: 1014
Length adjustment: 10
Effective length of query: 602
Effective length of database: 1004
Effective search space: 604408
Effective search space used: 604408
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no083_m15.g1 MSMg01no083_m15.g1 CHROMAT_FILE:
MSMg01no083_m15.g1 PHD_FILE: MSMg01no083_m15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:33:37 2005
(601 letters)
>mm_chr7_98954010_98955012
Length = 1003
Score = 253 bits (131), Expect = 2e-71
Identities = 145/151 (96%), Gaps = 4/151 (2%)
Strand = Plus / Minus
Query: 1 aggaataagttaagttagaggctctaacacttatttcctcattagaagaagagtgacggc 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 aggaataagttacgttagaggctctaacacttatttcctcattagaagaagagtgacggc 285
Query: 61 tgtgttctcttgatgagctctaagggg--aaaaaagtaagatacaaactctgttagcaga 118
||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||
Sbjct: 284 tgtgttctcttgatgagctctaagggggaaaaaaagtaagatacaaactctgttggcaga 225
Query: 119 gatttggtaaaaagaagaaaacgt--gacct 147
|||||||||||||||||||||||| |||||
Sbjct: 224 gatttggtaaaaagaagaaaacgtaagacct 194
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 601
Length of database: 1003
Length adjustment: 10
Effective length of query: 591
Effective length of database: 993
Effective search space: 586863
Effective search space used: 586863
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
