Query= MSMg01no084_h20.b1 MSMg01no084_h20.b1 CHROMAT_FILE:
MSMg01no084_h20.b1 PHD_FILE: MSMg01no084_h20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:34:32 2005
(341 letters)
>mm_chr7_141810482_141811222
Length = 741
Score = 603 bits (312), Expect = e-177
Identities = 321/324 (99%)
Strand = Plus / Plus
Query: 2 atgacaatgcccagctgcagtgtggaaaggctgcacacctgacagcaagcatttgttatt 61
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 202 atgacaatgcccagctgcagtgtggaaaggctgcgcacctgacagcaagcatttgttatt 261
Query: 62 ttgtaacatgaataaatcatagcgagtggctcagtggtataaagtgttacccagcttgct 121
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 262 ttgtaacatgaataaatcatagcaagtggctcagtggtataaagtgttacccagcttgct 321
Query: 122 tcaggtcccaagttcaaacctcaacactaagaagaagcaaggaaggaagaaaagagggag 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 tcaggtcccaagttcaaacctcaacactaagaagaagcaaggaaggaagaaaagagggag 381
Query: 182 gtaaggggggcggggggtggaggcagatggcagagggacagaaggagaaacagaaccata 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 gtaaggggggcggggggtggaggcagatggcagagggacagaaggagaaacagaaccata 441
Query: 242 aagattcttagttgttccctaatttatagtcaccttctctttcacagctgggttagaatt 301
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 442 aagattcttagttgttccctaatttatagtcaccttcactttcacagctgggttagaatt 501
Query: 302 gctactttgtttcttcccagggaa 325
||||||||||||||||||||||||
Sbjct: 502 gctactttgtttcttcccagggaa 525
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 341
Length of database: 741
Length adjustment: 9
Effective length of query: 332
Effective length of database: 732
Effective search space: 243024
Effective search space used: 243024
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no084_h20.g1 MSMg01no084_h20.g1 CHROMAT_FILE:
MSMg01no084_h20.g1 PHD_FILE: MSMg01no084_h20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:34:32 2005
(528 letters)
>mm_chr7_141951214_141952142
Length = 929
Score = 907 bits (469), Expect = 0.0
Identities = 514/529 (97%), Gaps = 1/529 (0%)
Strand = Plus / Minus
Query: 1 attcaggaaagac-aagtgaaggaaggtggctctcagagcacctgctgtgggcatcctta 59
||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 attcaggaaagacaaagtgtaggaaggtggctctcagagcacctgctgtgggcatcctta 670
Query: 60 gatgttgctctacactgtcctccaaacgaaagcctgctccaagtgacactcgtaggaaca 119
||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 669 gatgttgctctgcactgtcctccaaacgaaagcctgctccaggtgacactcgtaggaaca 610
Query: 120 cacggttagggagacaaagtcccaaagcatgtgtggaagggtctctccacttgcagctca 179
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 catggttagggagacaaagtcccaaagcatgtgtggaagggtctctccacttgcagctca 550
Query: 180 tactgaggaggagctggagagatggcagacaggaactgtgtcacccacatggtcaaagcg 239
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 549 tactgaggaggagctggagagatgacagacaggaactgtgtcacccacatggtcaaagca 490
Query: 240 tgaaacccaagtgggaaggagagcagcaagaagtccctttggccctcaggtagaaagaca 299
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 489 tgaaacccaagtgggaaggagagcagcaagaagtcccttcggccctcaggtagaaagaca 430
Query: 300 agggcagatgctggtgataaaagaatgatgttcagcagatgccagggagcatgaactata 359
||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||
Sbjct: 429 agggcagatgctggtgagaaaagaatgaggttcagcagatgccagggagcaggaactata 370
Query: 360 cagggtggagaagcagacccagccatagacaccgggaactgcctgcacaacttgtttaag 419
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 369 gagggtggagaagcagacccagccatagacaccgggaactgcctacacaacttgtttaag 310
Query: 420 gtgcacccatttctacaagtttccttttcctttttttctaagatagaaaatcccagatca 479
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gtgcgcccatttctacaagtttccttttcctttttttctaagatagaaaatcccagatca 250
Query: 480 ggagagagtcccaaggagaaaacggtgcccaagaaaggggatctcaatg 528
|||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 249 ggagagagtcccaaggagaaaagggtgcccaagaaaggggatctcaatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 528
Length of database: 929
Length adjustment: 10
Effective length of query: 518
Effective length of database: 919
Effective search space: 476042
Effective search space used: 476042
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
