MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-085I11
Chromosome	7 (Build37)
Map Location	56,894,132 - 57,048,386
singlet/doublet	doublet
Overlap gene	Htatip2, Prmt3
Upstream gene	Mrgprb3, EG639116, Zdhhc13, Csrp3, E2f8, LOC100040465, 9130015G15Rik, 5330421F07Rik, Dbx1
Downstream gene	Slc6a5, Nell1, 4933405O20Rik
Link	Open Mouse BAC browser

Click to get alignment info.

name	Mrgprb3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:404238 MGI:3033117
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG639116 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:639116 MGI:3646194
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 38 Proteins

name	Zdhhc13 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:243983 MGI:1919227
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Csrp3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13009 MGI:1330824
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	E2f8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:108961 MGI:1922038
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040465 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040465
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs

name	9130015G15Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74567 MGI:1921817
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	5330421F07Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78286 MGI:1925536
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dbx1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13172 MGI:94867
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Htatip2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:53415 MGI:1859271
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Prmt3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71974 MGI:1919224
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc6a5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:104245 MGI:105090
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nell1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:338352 MGI:2443902
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4933405O20Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:243996 MGI:2142174
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mrgprb3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46430529 GeneID:404238 MGI:3033117
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : MAS-related GPR, member B3 transcript_id : NM_207537.1

name	EG639116 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149257275 GeneID:639116 MGI:3646194
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 38 Proteins product : predicted gene, EG639116 transcript_id : XM_001474703.1

name	Zdhhc13 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142354488 GeneID:243983 MGI:1919227
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger, DHHC domain containing 13 transcript_id : NM_028031.2

name	Csrp3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:42476047 GeneID:13009 MGI:1330824
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cysteine and glycine-rich protein 3 transcript_id : NM_013808.3

name	E2f8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142380194 GeneID:108961 MGI:1922038
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : E2F transcription factor 8 transcript_id : NM_001013368.4

name	LOC100040465 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149257277 GeneID:100040465
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs product : hypothetical protein LOC100040465 transcript_id : XM_001474722.1

name	9130015G15Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149257320 GeneID:74567 MGI:1921817
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : RIKEN cDNA 9130015G15 gene transcript_id : XM_001477673.1

name	5330421F07Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31341493 GeneID:78286 MGI:1925536
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 5330421F07 gene transcript_id : NM_175272.2

name	Dbx1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:52421337 GeneID:13172 MGI:94867
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : developing brain homeobox 1 transcript_id : NM_001005232.1

name	Htatip2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:24475634 GeneID:53415 MGI:1859271
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : HIV-1 tat interactive protein 2, homolog (human) transcript_id : NM_016865.2

name	Prmt3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142347894 GeneID:71974 MGI:1919224
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein arginine N-methyltransferase 3 transcript_id : NM_133740.2

name	Slc6a5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:26080427 GeneID:104245 MGI:105090
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 6 (neurotransmitter transporter, glycine), member 5 transcript_id : NM_148931.2

name	Nell1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130973 GeneID:338352 MGI:2443902
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : NEL-like 1 (chicken) transcript_id : NM_001037906.2

name	4933405O20Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142350709 GeneID:243996 MGI:2142174
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4933405O20 gene transcript_id : NM_172901.2

name	Mrgprb3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46430530 CCDS:CCDS21304.1 GeneID:404238 MGI:3033117
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : MAS-related GPR, member B3 protein_id : NP_997420.1

name	EG639116 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149257276 GeneID:639116 MGI:3646194
definition	codon_start : 1 product : similar to MrgB2 G protein-coupled receptor protein_id : XP_001474753.1

name	Zdhhc13 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27229145 GeneID:243983 MGI:1919227
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008415 - acyltransferase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : HIP14-related protein product : zinc finger, DHHC domain containing 13 protein_id : NP_082307.1

name	Csrp3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7304987 CCDS:CCDS21305.1 GeneID:13009 MGI:1330824
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0030018 - Z disc [Evidence IDA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006874 - calcium ion homeostasis [Evidence IGI]; GO:0002026 - cardiac inotropy [Evidence IGI]; GO:0048738 - cardiac muscle development [Evidence IGI]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0007519 - striated muscle development [Evidence IEA] codon_start : 1 note : cysteine-rich protein 3; muscle LIM protein; cardiac LIM protein product : cysteine and glycine-rich protein 3 protein_id : NP_038836.1

name	E2f8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:67972650 GeneID:108961 MGI:1922038
definition	GO_component : GO:0005634 - nucleus [Evidence IDA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0042803 - protein homodimerization activity [Evidence IPI]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0008283 - cell proliferation [Evidence IDA]; GO:0000074 - regulation of progression through cell cycle [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : E2f family member 8 protein_id : NP_001013386.2

name	LOC100040465 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149257278 GeneID:100040465
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474772.1

name	9130015G15Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149257321 GeneID:74567 MGI:1921817
definition	codon_start : 1 product : hypothetical protein LOC74567 protein_id : XP_001477723.1

name	5330421F07Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30424928 GeneID:78286 MGI:1925536
definition	codon_start : 1 product : hypothetical protein LOC78286 protein_id : NP_780481.1

name	Dbx1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:52421338 CCDS:CCDS21306.1 GeneID:13172 MGI:94867
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 note : Mmox C product : developing brain homeobox 1 protein_id : NP_001005232.1

name	Htatip2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:15723368 GeneID:53415 MGI:1859271
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005635 - nuclear envelope [Evidence ISS]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS]; GO:0004674 - protein serine/threonine kinase activity [Evidence ISS] GO_process : GO:0001525 - angiogenesis [Evidence IEA]; GO:0006915 - apoptosis [Evidence IEA]; GO:0007049 - cell cycle [Evidence IEA]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0045786 - negative regulation of progression through cell cycle [Evidence IEA]; GO:0051170 - nuclear import [Evidence ISS]; GO:0043068 - positive regulation of programmed cell death [Evidence ISS]; GO:0046022 - positive regulation of transcription from RNA polymerase II promoter, mitotic [Evidence ISS]; GO:0046777 - protein amino acid autophosphorylation [Evidence ISS]; GO:0045765 - regulation of angiogenesis [Evidence ISS]; GO:0042981 - regulation of apoptosis [Evidence ISS] codon_start : 1 note : tat-interacting protein 30 kDa; HIV-1 tat interactive protein 2, 30 kDa homolog product : HIV-1 tat interactive protein 2, homolog protein_id : NP_058561.1

name	Prmt3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29789323 CCDS:CCDS21307.1 GeneID:71974 MGI:1919224
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008276 - protein methyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006479 - protein amino acid methylation [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : protein arginine methyltransferase 3; heterogeneous nuclear ribonucleoprotein methyltransferase-like 3 product : protein arginine N-methyltransferase 3 protein_id : NP_598501.1

name	Slc6a5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22507331 CCDS:CCDS21308.1 GeneID:104245 MGI:105090
definition	GO_component : GO:0005624 - membrane fraction [Evidence IEA] GO_function : GO:0005279 - amino acid-polyamine transporter activity [Evidence IEA]; GO:0015293 - symporter activity [Evidence IEA] GO_process : GO:0006865 - amino acid transport [Evidence IEA]; GO:0007269 - neurotransmitter secretion [Evidence IEA] codon_start : 1 exception : mismatches in translation note : glycine transporter 2 product : solute carrier family 6 (neurotransmitter transporter, glycine), member 5 protein_id : NP_683733.1

name	Nell1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83776571 CCDS:CCDS21309.1 GeneID:338352 MGI:2443902
definition	GO_function : GO:0016301 - kinase activity [Evidence IEA]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA] codon_start : 1 product : protein kinase C-binding protein NELL1 protein_id : NP_001032995.1

name	4933405O20Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370380 GeneID:243996 MGI:2142174
definition	GO_component : GO:0005739 - mitochondrion [Evidence IEA] GO_function : GO:0004449 - isocitrate dehydrogenase (NAD+) activity [Evidence IEA]; GO:0016652 - oxidoreductase activity, acting on NADH or NADPH, NAD or NADP as acceptor [Evidence IEA] GO_process : GO:0006099 - tricarboxylic acid cycle [Evidence IEA] codon_start : 1 product : hypothetical protein LOC243996 protein_id : NP_766489.1

clone name	MSMg01-327C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-548H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-152J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-081D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-082F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-379E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-488O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-075I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-369H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421F24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-319A11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-329E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-218I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-505O08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407M11
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-412I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439P13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-365O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395L12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-329C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288C12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-341L06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-300L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-268C02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-408L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-493I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-068O05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-341M02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-261N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-113F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-085I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-445A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461O08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103C11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495D03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531L14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-365L10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-267C13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507M08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-420E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538O07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-479L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-360E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-064C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-263L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-469L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383L23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-212D10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-421C23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-211N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-300A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-262D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-396P03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-217L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-262D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-479D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-318K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-276A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-362P16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-469G17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-514D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-432G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-115E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-266B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-334A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271A20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111E18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-037K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176N13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274F18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114G21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065B21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276G16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316E07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-322B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023E18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137G16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-320G09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107D01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-295C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246H07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-022E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-286K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-107O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204P10
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-085I11.T7 (MSMg01no085_i11.b1)	MSMg01-085I11.TJ (MSMg01no085_i11.g1)
ACC	AG305080	AG305081
length	1,118	1,170
length of high quality (start - end)	132 (23 - 154)	134 (59 - 192)
definition	CHROMAT_FILE: MSMg01no085_i11.b1 PHD_FILE: MSMg01no085_i11.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 17:36:25 2005	CHROMAT_FILE: MSMg01no085_i11.g1 PHD_FILE: MSMg01no085_i11.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 17:36:25 2005
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(57,048,255 - 57,048,386)	(56,894,132 - 56,894,262)
sequence	TCTATTTTTGACCCCCCACAGCAATATAGAAAGGGAGGGAAAGGACAGAG GGGGAGAAGAAAATGTGAGAAGCGAGGACGGACTAGTCCACAAACACACA GCACTAGTACTCACACAAAGAAACATACACAATCAGATGTGCACAAGCTC ATGTGAGCATACAGAGAAAGCAAGACAGATCCACACAAACACACAAACCA TATGAGCATCTTCTACATAAAGACTATGCCTGTCAAGACGGTTCAGTAGG CAAAGGCGCCTACCACCAAGCTTGGGCCTGCTCCCTGGGAATTTTTTTTT GTAAGGAGAACAGACTGTTGTAAGTTCTCCCTGCACTCCACCCCTGCTCC ATGTCACGCACATGTGTGTTCACCCACTCACTATCAGCACTGTTGACTTG TCTCATTATACTATTGTCTCTTGCTGCTAAGTCTGACTACTCTGTAATCC ATATGATCCCGATCTATTCTTTATACCATTTCCTATACTCTGTGTTATGT ATATGCTTCTCCTATCTTATACCTTATTTCTATTTTTTTGGAATATCAAT TTTATAATAATTTCTTTAATTTGTTATTTTATTATTTATATCTTATATCG TCTTTTATTTTATTACTTGATTTTCCATTAATTACATTCTTTCCTCATGT ACTTATATATTTTCAATTATATTCCTATCTTTTATATTTTACTCTACTCT ATCTTTTGTACTTTAATTTTTCTTATTTTAATTAATTTATTACTTTTCTT TGCTTTCTCTTTTTATTTATTCTTCTTTTATATTTTTTCATTTTAATTTT CATCCCTTACTTTTTCTTTTCTTTTTTTTATTTCTTCCTTCTCTCTTCTT TTTCTTTTTTTTTTCATTATTCATTTTTTATTTCTCTTTTCTTTTCTTTC TACTTATTATTTTTCTTTTCCTATTGTTTTTTTTTTCTTTATTCTTCTTA TTCCTAAATTTACTTTTCATTTTTTATCTTTTTATTATTTCCTTCTTTTT TTTCTATAATTTTTATTTTATTTATTTTTTTTTCTTTTTTTTTTTTCTCT TTTATTATTTTTTATTGATCTTTATTGTTTTCTATTTTTATCTTTTTCTT TTTTTTTATACTCTTTTT	TTAAATGTGCCACTGGNGAAACTGCAGAGTTTCTGAACCCTTTAATGTTC CTGCGTTAGGAGGAAAAGCCTTCTAGAATGACCAGATCAAAAAAGTGGCC ATTTAAATATAGAGGTGGCGCGGCAGGATTGTGTACGTGCAAGATCTGTT GGGGGAGTTTTGAAAGTTCTTTTTAAAAGTTATTCAGCATAATAGACTAA TACCCCCTTTTCCTCCTCTCCTCCTTCTCTCCCCCTTTTCTTTATTTCCT GTTTTTCCTCTCCAAACTCCTCCTCTCCTCCCTCCCTCCCACGCCCTTCT TATTCCCTACCCCTTTCCTTTACCCGCTCTCTTTTCCCTACCCCCATCCC CTTCAGCTCATCTGAGCTATTTCGAAATTCTCGAATATCCTTGTTCCTAC TCGTGCGCTTATCCCTATCCATCCGGTACTCCCTCCTCTTGGGTAGCTCG GATCTCAACCTCAACCTCCATAATTCTTTCATTTTTCTGTTCCTATTTAT ATCATTATTTTCTTTTTCGTTTTTTTCTATTCTTTGCCTCCTTCGTTTAT TTCTTGTGTTTGTTTTCTTTTTGTTTTTCCCCAATATTTTTCATTTTTTT CCTTCTTCTTTTCTTTTTCTTTTTATTTTCTTATCTCTTTTTATTTTTTT CTTTTTTTCTCTATTCTTTTGTTCCATTATTTTTTAATTTTCACCCCTAC ATTATATCTTTTTTTTTTTTTTTTTTACTCTTTTTATTTATCTTTATTTT TTTTCTTATTTTTCTTTTTAATTTTAATTTTATCCTATTTCTTTCTTTTT CTTTTTTTTCTTTTTTCTTTTCCTTATTTTTCTTTTTACTTTATTATCCT TCTTACTATCTTTTTCTTTATTTTTTTTTTTTTTCTTTATTTTTTTTATT TTTATACTTTTATTTCATTTTATTATTTTTTCTTATCTTCCTTTCTATTA TATTTAATTTTTTTTCACATTTTTTTTTTTTATCATAATTTATTTTATTC TTTTATTTTTCTTTACTTATTTTTTTCTCTTATTTTCTACTCTTCTCTAT CCTTTTAACCATTCTCCTTTACTTTTTGTATATATATCTATTATCTTTTT TTCCTCCTATCTTTTTTTTTCTCCTTCTATTTTATATCAATCCTATCTTT CTTTTTTTCATCATTCCTTT
quality values	Open. Hide. 6 6 6 6 8 8 14 21 15 15 10 9 9 9 9 9 10 19 17 17 10 13 13 30 30 28 24 20 16 16 23 25 31 24 24 25 33 25 28 30 30 27 32 29 29 33 31 42 33 24 23 23 23 23 23 28 36 36 29 25 29 29 36 29 31 28 28 20 28 18 24 13 14 14 21 27 32 37 40 28 28 20 24 24 12 12 15 32 32 36 29 29 33 42 42 35 32 32 35 43 42 35 33 32 36 13 11 11 11 18 27 32 37 38 43 29 29 29 33 38 42 43 43 37 37 35 44 32 32 20 20 20 24 24 14 14 24 36 36 57 35 35 32 43 23 22 27 33 39 42 42 24 24 11 11 11 15 12 14 27 19 11 11 11 19 24 23 27 20 16 16 15 15 15 32 32 43 43 52 44 43 21 20 20 20 18 19 11 12 12 24 24 36 16 15 10 10 10 10 12 24 43 27 27 14 14 14 32 32 57 57 57 27 23 10 8 8 8 8 9 9 12 11 25 25 42 44 37 33 30 32 32 19 17 17 22 26 28 21 15 11 11 12 21 15 20 20 28 24 22 17 17 20 22 26 17 15 15 15 18 23 33 28 30 30 33 21 28 13 13 12 23 11 9 9 15 15 18 17 9 10 9 12 13 18 23 12 12 10 8 8 8 8 8 11 19 10 13 12 10 9 9 9 10 13 18 15 13 13 18 18 14 28 21 28 28 31 15 14 9 9 10 10 14 23 12 12 12 18 18 21 18 11 11 15 15 20 24 25 25 19 24 12 12 10 12 12 14 14 14 22 34 34 28 20 20 18 25 17 20 20 24 28 20 16 11 11 11 16 22 13 13 12 10 8 8 8 8 8 6 6 7 8 8 10 9 9 9 9 9 11 11 12 15 15 14 10 8 9 8 10 10 18 18 25 24 16 14 18 10 10 10 10 10 8 8 9 9 10 9 9 9 9 9 10 8 8 8 8 8 8 12 20 12 11 10 8 10 10 11 9 9 13 8 13 11 16 15 15 12 11 11 12 21 13 12 12 12 13 9 9 9 11 8 8 8 8 14 12 28 18 19 13 10 10 8 8 6 6 8 8 8 13 13 8 8 8 8 10 10 12 12 10 8 8 8 13 10 10 12 12 11 12 8 8 8 6 8 8 9 9 15 13 14 6 6 8 8 11 8 9 9 9 9 12 9 8 8 6 6 8 8 13 21 15 11 10 8 6 6 8 8 10 10 8 8 8 8 8 8 9 8 8 8 8 8 8 8 8 8 8 8 10 9 12 11 8 8 8 8 10 10 10 10 9 9 8 8 10 11 8 8 6 6 8 8 11 8 8 8 8 8 8 15 15 8 8 8 8 8 8 8 8 8 8 8 8 9 11 11 11 11 9 8 8 8 8 8 8 8 8 10 14 14 11 9 9 8 8 10 10 8 8 9 9 9 11 13 8 8 8 8 8 8 8 13 10 10 10 10 10 11 11 11 10 10 8 8 8 8 10 8 9 9 9 9 15 12 8 8 7 6 8 8 8 6 6 8 12 12 17 22 10 8 8 12 10 15 13 9 9 9 9 12 12 9 9 9 9 8 8 8 6 7 8 8 8 8 8 8 8 10 11 11 11 11 11 14 14 16 11 11 8 8 7 7 8 8 6 6 8 8 10 10 10 10 9 15 16 12 10 8 8 8 10 8 8 8 8 8 8 8 10 8 8 8 8 6 6 8 15 12 10 8 8 8 8 8 8 8 8 8 8 8 8 11 10 8 8 8 8 8 8 12 8 12 12 10 9 9 9 10 12 7 7 8 8 17 10 10 9 9 10 10 11 9 8 10 8 8 8 10 10 8 8 8 8 10 10 16 10 10 10 10 10 12 10 11 10 10 10 10 10 10 10 10 12 10 12 6 7 6 6 8 6 6 6 6 8 8 10 10 6 6 6 7 7 8 11 8 12 8 12 8 9 7 10 6 8 8 8 8 8 8 8 13 8 8 8 8 8 8 8 8 8 9 11 10 9 9 9 9 8 8 8 6 6 12 8 8 8 8 8 8 8 8 8 8 10 11 18 10 13 8 8 8 8 12 10 8 8 8 7 9 9 9 9 10 10 15 19 16 14 10 10 9 9 8 8 8 8 8 8 10 9 12 10 7 7 8 8 8 8 8 8 8 8 9 9 10 10 12 9 13 8 6 6 6 6 8 10 12 13 9 9 8 8 8 8 10 8 10 9 10 9 9 9 12 15 18 12 11 8 8 6 7 13 12 22 20 20 11 11 9 9 8 8 8 12 12 11 12 12 7 7 8 8 12 10 10 12 16 9 11 10 10 8 8 8 8 10 8 8 8 8 8 12 9 8 9 12 12 12 13 14 10 10 10 13 10 10 8 8 10 10 8 8 9 13 10 13 13 8 8 8 7 7 6 6 6 6 10 8 8 8 8 9 9 11 11 8 8 6 6 8 10 17 12 8 8 8 8 8 8 8 8 8 8 8 8 10 12 16 18 8 8 6 6 8 6 6 7 7 11 7 10 10 10	Open. Hide. 6 6 6 6 6 6 6 6 6 10 10 14 16 19 17 3 0 3 21 21 29 30 31 31 31 31 33 36 36 37 37 33 37 37 37 37 27 16 12 9 8 8 9 10 10 10 11 14 19 21 16 12 12 12 9 9 11 15 15 23 32 32 39 43 43 43 43 43 40 40 43 43 37 37 30 30 28 40 37 43 40 39 39 36 43 43 43 43 39 39 39 43 43 47 43 46 36 36 25 25 36 36 43 48 54 54 57 57 44 44 37 31 31 42 41 37 35 37 37 28 36 23 23 23 32 36 42 44 47 44 43 43 44 44 48 48 48 48 48 43 43 37 37 37 43 44 43 37 35 43 36 42 38 33 35 35 38 38 43 50 50 52 52 50 50 52 52 52 52 52 57 57 57 52 52 37 52 52 52 57 57 44 44 36 24 20 32 32 17 17 15 28 28 11 11 11 32 32 21 15 15 16 32 27 38 38 35 38 37 50 44 52 52 52 52 52 52 57 57 52 52 52 57 57 52 52 52 57 52 52 52 52 52 43 43 44 57 50 50 47 50 47 50 50 50 43 35 33 24 32 30 41 35 42 32 36 28 28 22 30 24 25 19 12 11 12 19 23 21 11 11 16 24 36 57 46 43 39 39 37 35 35 39 28 21 13 12 12 21 19 20 20 18 18 28 31 42 37 32 32 35 39 32 37 23 23 20 30 25 35 35 39 39 47 47 43 43 43 43 37 34 28 23 20 22 20 9 9 9 9 9 9 11 12 11 10 9 9 9 9 16 16 24 19 16 15 12 12 13 15 11 10 10 12 9 9 11 12 12 12 12 9 9 9 8 8 8 8 8 8 10 10 11 11 15 15 15 18 21 27 29 15 12 11 11 10 10 10 10 19 17 23 12 10 10 10 10 10 16 16 13 11 8 8 8 7 8 6 6 8 8 11 11 11 12 10 10 8 8 8 10 14 21 15 9 9 9 9 9 10 21 15 13 15 26 26 36 39 24 23 12 8 8 8 10 8 8 8 10 8 9 8 8 6 6 8 8 10 11 12 10 10 9 9 10 10 10 12 13 11 11 11 11 12 12 11 11 9 13 8 8 8 11 12 16 13 13 11 11 8 8 8 8 8 8 8 9 9 11 9 9 9 9 9 9 9 10 10 12 12 10 10 10 13 10 10 10 9 9 9 17 10 10 10 12 8 10 8 8 9 10 9 8 8 8 8 8 9 12 11 10 10 10 10 10 10 10 10 11 12 12 8 8 8 8 8 8 8 8 8 8 8 9 8 8 8 8 10 10 12 10 8 8 8 10 10 12 10 10 8 8 8 8 8 8 8 10 11 12 10 10 10 10 10 12 14 12 10 10 10 9 9 9 8 8 8 8 7 7 8 8 9 9 13 23 19 14 10 13 10 10 9 9 9 9 10 10 12 10 6 6 6 6 10 6 6 8 8 9 12 14 9 9 10 10 9 11 10 8 8 9 9 11 12 14 10 10 10 10 10 10 12 16 12 10 15 10 11 10 10 10 8 8 8 10 8 10 10 10 14 12 10 10 9 8 8 6 6 8 8 12 8 6 6 9 7 7 8 6 6 8 8 10 10 10 13 9 9 10 10 10 10 10 14 12 16 14 19 14 10 12 10 9 9 10 8 8 8 6 6 6 6 10 8 8 6 7 8 8 10 10 11 8 11 8 10 10 14 11 10 10 10 10 8 8 8 8 10 10 10 19 19 25 28 16 12 8 10 8 8 9 9 10 10 6 6 8 8 8 10 6 7 8 8 8 8 8 8 8 8 10 8 6 8 8 8 8 8 8 8 6 6 10 10 13 10 9 9 9 9 8 12 9 9 9 8 10 10 8 8 10 8 8 8 11 11 18 15 25 15 12 11 10 10 10 8 7 7 7 10 8 6 6 8 8 8 8 8 8 8 8 8 8 6 6 6 6 8 8 11 9 9 9 10 10 8 8 8 8 8 10 8 13 15 13 12 14 9 9 9 9 10 10 10 9 9 9 8 10 10 8 8 8 8 8 10 7 7 8 8 8 10 6 6 8 7 8 8 10 10 8 8 8 8 10 8 10 10 14 10 10 10 10 8 8 8 10 14 10 10 10 11 11 12 12 12 12 9 8 8 8 8 12 11 6 6 8 8 10 15 11 11 10 10 10 10 9 9 9 9 12 10 10 10 9 8 6 6 6 8 10 11 11 11 12 12 11 11 13 13 9 8 9 9 8 8 8 8 8 13 8 8 8 11 12 11 8 8 8 8 8 8 8 6 7 8 10 12 8 9 9 9 12 13 10 9 9 10 10 10 8 10 13 8 10 6 6 6 8 13 8 8 10 10 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 9 9 10 10 8 10 10 10 10 8 8 8 8 8 8 9 9 8 8 8 8 8 10 17 14 8 8 8 8 8 8 8 8 8 8 12 8 8 10 11 10 8 8 8 10 13 15 20 12 15 9 10 12 13 9 9 10 10 9 9 9 17 17 17 12 11 10 9 9 14 10 8 6 6 8 8 8 6 8 8 8 8 8 8 8 8 10 8 8 6 6 8 8 6 6 8 8 8 8 6 6 8 8 11 8 8 8 10 8 8 8 8 8 6 6 8 8 8 6

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no085_i11.b1 MSMg01no085_i11.b1 CHROMAT_FILE:
MSMg01no085_i11.b1 PHD_FILE: MSMg01no085_i11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:36:25 2005
         (132 letters)



>mm_chr7_57048055_57048586
          Length = 532

 Score =  240 bits (124), Expect = 3e-68
 Identities = 130/132 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   aatatagaaagggagggaaaggacagagggggagaagaaaatgtgagaagcgaggacgga 60
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 332 aatatagaaagggagggaaaggacagagggggagaagaaaatgtgagaagtgaggacgga 273

                                                                       
Query: 61  ctagtccacaaacacacagcactagtactcacacaaagaaacatacacaatcagatgtgc 120
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 272 ctagtccacaaacacacagcacaagtactcacacaaagaaacatacacaatcagatgtgc 213

                       
Query: 121 acaagctcatgt 132
           ||||||||||||
Sbjct: 212 acaagctcatgt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 132
Length of database: 532
Length adjustment: 8
Effective length of query: 124
Effective length of database: 524
Effective search space:    64976
Effective search space used:    64976
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

Query= MSMg01no085_i11.g1 MSMg01no085_i11.g1 CHROMAT_FILE:
MSMg01no085_i11.g1 PHD_FILE: MSMg01no085_i11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:36:25 2005
         (134 letters)



>mm_chr7_56893932_56894465
          Length = 534

 Score =  230 bits (119), Expect = 2e-65
 Identities = 128/131 (97%)
 Strand = Plus / Plus

                                                                       
Query: 1   ggaggaaaagccttctagaatgaccagatcaaaaaagtggccatttaaatatagaggtgg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 201 ggaggaaaagccttctagaatgaccagatcaaaaaagtggccatttaaatatagacgtgg 260

                                                                       
Query: 61  cgcggcaggattgtgtacgtgcaagatctgttgggggagttttgaaagttctttttaaaa 120
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cacggcaggattgtgtacgtgcaagatctgttgggggagttttgaaagttctttttaaaa 320

                      
Query: 121 gttattcagca 131
           ||| |||||||
Sbjct: 321 gttcttcagca 331


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 134
Length of database: 534
Length adjustment: 8
Effective length of query: 126
Effective length of database: 526
Effective search space:    66276
Effective search space used:    66276
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information