Query= MSMg01no086_g24.b1 MSMg01no086_g24.b1 CHROMAT_FILE:
MSMg01no086_g24.b1 PHD_FILE: MSMg01no086_g24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:38:11 2005
(586 letters)
>mm_chr7_87802590_87803573
Length = 984
Score = 1044 bits (540), Expect = 0.0
Identities = 572/584 (97%), Gaps = 4/584 (0%)
Strand = Plus / Minus
Query: 4 ggaattctttgaatattacagatctgtgctgtcttac-aatagtctttctcatactccct 62
||||||||||||||| || ||||||||||||| |||| ||||||||||||||||||||||
Sbjct: 784 ggaattctttgaatagtagagatctgtgctgttttacaaatagtctttctcatactccct 725
Query: 63 cactgtttaatgatgtttttgttaatatcttttcttcatgttgttaaaggtccagtgttg 122
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 724 cactgtttaatgatgtttttgttaatatcttctcttcatgttgttaaaggtccagtgttg 665
Query: 123 gttgatactcaagtcaatgagaatacagattcattcactcagcaaatatttccttaaagc 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 gttgatactcaagtcaatgagaatacagattcattcactcagcaaatatttccttaaagc 605
Query: 183 cggaccatttgggggtgcctattcagctaggacagccctaaaccctgactttcagtctgt 242
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 cggatcatttgggggtgcctattcagctaggacagccctaaaccctgactttcagtctgt 545
Query: 243 gccactgataatggcccttcacgctggcttgagcggattcctgaaaaaaaaaaatgtttt 302
||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 544 gccactgataatggcccttcacgctggcttgagcggattcctg---aaaaagaatgtttt 488
Query: 303 ctcagaggcaaggagacccaaacatttcccagattttggccacataatcagaaatttcaa 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 ctcagaggcaaggagacccaaacatttcccagattttggccacataatcagaaatttcaa 428
Query: 363 aagagttctggaatttatgggctggcctccaagttatcaggcatctgtcatcttctccga 422
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 427 aagagttctggaatttatgggctggcctccaagttatcaggcatctgtcgtcttctccga 368
Query: 423 gggcagtttactctgagctcagtccaccctcctccctcagctgtgcagagcaaatggggc 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 gggcagtttactctgagctcagtccaccctcctccctcagctgtgcagagcaaatggggc 308
Query: 483 agatgagaaatacttcagacgtccccgtgggatgaactccaaagacagcctcagcagcta 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 agatgagaaatacttcagacgtccccgtgggatgaactccaaagacagcctcagcagcta 248
Query: 543 gacgcaggattcatatggccagggtttggcaggctcttctgagg 586
||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 247 gacgcagaattcatatggccagggtttggcaggctcttctgagg 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 586
Length of database: 984
Length adjustment: 10
Effective length of query: 576
Effective length of database: 974
Effective search space: 561024
Effective search space used: 561024
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no086_g24.g1 MSMg01no086_g24.g1 CHROMAT_FILE:
MSMg01no086_g24.g1 PHD_FILE: MSMg01no086_g24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:38:11 2005
(411 letters)
>mm_chr7_87675347_87676157
Length = 811
Score = 743 bits (384), Expect = 0.0
Identities = 402/408 (98%)
Strand = Plus / Plus
Query: 4 agttggggtatggaggctccacctcttcccacatcccttgcactatgttagttcttccac 63
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 agttggggtatgaaggctccacctcttcccacatcccttgcactatgttagttcttccac 263
Query: 64 tttcctgaaatgtacccttttaaaaacaaactagaacctagaaagcagatgtctggtttt 123
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tttcctgaaaggtacccttttaaaaacaaactagaacctagaaagcagatgtctggtttt 323
Query: 124 ccctgaggtctatgagttaccttagcaaattactgaactactcaaaaaacaaaacaaaag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ccctgaggtctatgagttaccttagcaaattactgaactactcaaaaaacaaaacaaaag 383
Query: 184 aaaaccctatcatgcaaatctggtttgcagccgggtttgatagttgcgaggaatattgga 243
||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aaagcactatcatgcaaatctggtttgcagccgggtttgatagttgcgaggaatattgga 443
Query: 244 gttccctatttgtggttagagtctgaagcagaggaaaggaagatgtggggccaggcatgg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gttccctatttgtggttagagtctgaagcagaggaaaggaagatgtggggccaggcatgg 503
Query: 304 tggtgcatgcctgtaatcccagtgctccagaagctgaggcagcacgatcactgagagtat 363
|||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 504 tggtgcatgcctgtaatcccagtgctccagaagctgaggcagtaggatcactgagagtat 563
Query: 364 gagggcagcctgacctaatagtaaggcagaaatgaagtgtgatatggg 411
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gagggcagcctgacctaatagtaaggcagaaatgaagtgtgatatggg 611
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 411
Length of database: 811
Length adjustment: 9
Effective length of query: 402
Effective length of database: 802
Effective search space: 322404
Effective search space used: 322404
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
