Query= MSMg01no086_h24.b1 MSMg01no086_h24.b1 CHROMAT_FILE:
MSMg01no086_h24.b1 PHD_FILE: MSMg01no086_h24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:38:16 2005
(639 letters)
>mm_chr7_98044183_98045221
Length = 1039
Score = 1174 bits (607), Expect = 0.0
Identities = 628/635 (98%)
Strand = Plus / Plus
Query: 5 gaattcattttaatatcccttagaattaatgtagggttgagaaaatgagagctgtgtctt 64
||||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||||
Sbjct: 205 gaattaattttaatatccattagaattaatgtagggttgaaaaaatgagagctgtgtctt 264
Query: 65 tatgtgttataactaattttgtgctaatcataatgacataagcaaattggcctgacttgc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tatgtgttataactaattttgtgctaatcataatgacataagcaaattggcctgacttgc 324
Query: 125 ccatggtcccacagagaattgactgtggagcagttggacaataattgtcatgcagaactg 184
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ccatggtcccgcagagaattgactgtggagcagttggacaataattgtcatgcagaactg 384
Query: 185 aatttatcttaaaagcagggcagcgtgatgaatgacagtacagccttaaaagttagattt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aatttatcttaaaagcagggcagcgtgatgaatgacagtacagccttaaaagttagattt 444
Query: 245 cttatgtactatattggtcctcctgtttattatctccctggttggcaaatattaattaat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cttatgtactatattggtcctcctgtttattatctccctggttggcaaatattaattaat 504
Query: 305 taacctgtcttgatattcttatttatttaatgaaatgatgcttcatgtgtagtagctaca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 taacctgtcttgatattcttatttatttaatgaaatgatgcttcatgtgtagtagctaca 564
Query: 365 ctaatccatgcatgtgtagttttattaattgttcacattttctggggtgatcttcatgaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ctaatccatgcatgtgtagttttattaattgttcacattttctggggtgatcttcatgaa 624
Query: 425 tatccacacaaatcttttccttttaagtttccagaactttctcaaagtggattagattaa 484
|||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 625 tatccatacaaatcttttccttttaagtttccagaactttctcaaagtgggttagattaa 684
Query: 485 gcccatggttcatttcttacaaagatagttaccaagtgtacactacatgccagctattat 544
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 685 gcccatggttcatttcttacaaagatagtttccaagtgtacactacatgccagctattat 744
Query: 545 tctgagctgagcagaatagagcagtgaatagaacaggtgaacctgtgctctcttagaact 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tctgagctgagcagaatagagcagtgaatagaacaggtgaacctgtgctctcttagaact 804
Query: 605 tatataatggagtgaagatagagactttcagtgag 639
|||||||||||||||||||||||||||||||||||
Sbjct: 805 tatataatggagtgaagatagagactttcagtgag 839
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1039
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1029
Effective search space: 647241
Effective search space used: 647241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no086_h24.g1 MSMg01no086_h24.g1 CHROMAT_FILE:
MSMg01no086_h24.g1 PHD_FILE: MSMg01no086_h24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:38:16 2005
(291 letters)
>mm_chr7_98077500_98078189
Length = 690
Score = 516 bits (267), Expect = e-151
Identities = 285/291 (97%), Gaps = 1/291 (0%)
Strand = Plus / Minus
Query: 1 ttgaaaattggagaactgaaatacggagttagcacgcagggaaaggctgttaccccagga 60
|||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 442 ttgaaatttggagaactgaaatactgagttagcacgcagggaaaggctgttaccccagga 383
Query: 61 atcagaggaagccagtggttgacaacaatattaaattcatgtgattgaaatggaaaaacc 120
||||||||||||||||||||||||||||||| |||||| |||||||||||||| ||| ||
Sbjct: 382 atcagaggaagccagtggttgacaacaatatgaaattcgtgtgattgaaatgg-aaagcc 324
Query: 121 attaaaaggttttaggtaagagggaaagtcggatggtgagagttgtggttttcagactgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 attaaaaggttttaggtaagagggaaagtcggatggtgagagttgtggttttcagactgt 264
Query: 181 tttgctcacgcactgacatatgagaagtatgaataagaggattcagttaaaatgttcttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tttgctcacgcactgacatatgagaagtatgaataagaggattcagttaaaatgttcttg 204
Query: 241 tttgccaggcagtggtggtacatgcttttaatcccagcatttgggaggtag 291
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 tttgccaggcagtggtggtacatgcttttaatcccagcatttgggaggtag 153
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 690
Length adjustment: 9
Effective length of query: 282
Effective length of database: 681
Effective search space: 192042
Effective search space used: 192042
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
