CTCCTTTATTCCAGAGATGCGCGGAATTCAGACTGCCTTCCCTCGCTAGA
CCCTTGGTGCTGCCCAGGATGTGTACTGCTACTGTCCTGACAACCTATAT
ATCCACTCTCCCCAATGACTATTTTTAGCCTTCTATTGTCCCTTCATATC
TCCAGATGCAACTGCATTCTGCTCCCCATTTCCTCTCAATGACATAATCA
CTCCATGTGAAGGCTACTGGGTGTCCCTTCAGCCTCCTACCTGTCACTCG
TGTGCTCATTCCCACCTCCCCCAAATCTACCATCTTAAAACCTCTCCTCT
AACTGAAGCCATTCCACCTCCATCAGGTTATTCCCAGAAGTGTTTAAAAA
GTACTCAAGTCCCCTCTGGGTTATCTCAATATATCACTATAAAATAGGTA
ATATCTAAGATGCCCATAATGAGTGCCATTTACAAGTGCCAGACACATGC
CTGGAATACCACAGACATGCATGATCTCACTTGAATTTCAATCACAAGGG
CTTTTTGACATGCATATAAAGATAACAGGATGTCATAGATTGCACAGGTA
AAGAATAGGAAATAAGTATCATTCTTTTCCCAGTAGGTAGTAAAGGACTT
TAAAATCTTTATTTTGATCCCTAACACTCTGGCTCTCTGGTACCGTCTGT
GTTGATGAAACCCCAAGAGAATAATAAAATT

NNNNNNNNNNNNNNNNNCCCCCCCCNCCCNCCCCCCCCCTTCCCCCCCTA
TACTNNCTCTCTATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTGAAGAGAGTCCAGGA
GAGGTAATGGGTCAAGGTGAAACCCAGCTGCAGTGGAGACCCTAGTGTTT
TGAAGATGTCAGGACCAGGGGATGACCACCAAGGATAGCTGCAGTCATGA
AGTAGCAGCAGCCTGAGCCTAGGAGGTGAAGTGTGTGTGTGTGTGTGTGT
GTCATGTGTGTGTGTGTGTGTCTGTGTGTGTGTGTTTGTGTGTATGTGTG
TGCCTGTGTGTTTGCGTGCACGCCTTCTTTCTTTTTTTTTCTTCACCCTT
CGTCCTCTTTTCTCTATACTTCCTCCTTTCTCCCCCTTCATCCCCCTACT
CTATCTTTCTTTCTTTTTTCTCTTACCCTTTTTCTTCCCTCTACATATTT
TAAGCTAAACTCTTTTTTTCTCTTTTCTCTTATCTCTTTCCCTGATTCCC
TTTTTTCCCCCTCCCCCTCTTTCTTTCCCTTTCCACTTTCTCCCTTTCCC
CCCTTTTCCTTTTTTTACTCCACCCACTCCACCAAACCCCCTCCTTTGTC
CCCTTTTCTTTACACTTCTCTCCCTCTTCTCACCTCTTATCTTATTTCAT
TTATCTCCTTCTTCCTTCTCTCTCTTTTTACATCTACTTACCTTATACTC
AAACCTACCCCCTTATCTTCATCCTTCCTCTACTTTATCACCCCCCCTTT
CACTAACTTTATTCTTATCCTCTTTCCTTATATAATTCCTTTCCC

Query= MSMg01no086_m04.b1 MSMg01no086_m04.b1 CHROMAT_FILE:
MSMg01no086_m04.b1 PHD_FILE: MSMg01no086_m04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:38:37 2005
         (500 letters)



>mm_chr7_131259299_131260198
          Length = 900

 Score =  944 bits (488), Expect = 0.0
 Identities = 494/496 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   ctagacccttggtgctgcccaggatgtgtactgctactgtcctgacaacctatatatcca 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 809 ctagacccttggtgctgcccaggatgtgtactgctactgtcctgacaacctatatatcca 750

                                                                       
Query: 65  ctctccccaatgactatttttagccttctattgtcccttcatatctccagatgcaactgc 124
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 749 ctctccccaatgactatttttaaccttctattgtcccttcatatctccagatgcaactgc 690

                                                                       
Query: 125 attctgctccccatttcctctcaatgacataatcactccatgtgaaggctactgggtgtc 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 attctgctccccatttcctctcaatgacataatcactccatgtgaaggctactgggtgtc 630

                                                                       
Query: 185 ccttcagcctcctacctgtcactcgtgtgctcattcccacctcccccaaatctaccatct 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 ccttcagcctcctacctgtcactcgtgtgctcattcccacctcccccaaatctaccatct 570

                                                                       
Query: 245 taaaacctctcctctaactgaagccattccacctccatcaggttattcccagaagtgttt 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 taaaacctctcctctaactgaagccattccacctccatcaggttattcccagaagtgttt 510

                                                                       
Query: 305 aaaaagtactcaagtcccctctgggttatctcaatatatcactataaaataggtaatatc 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 aaaaagtactcaagtcccctctgggttatctcaatatatcactataaaataggtaatatc 450

                                                                       
Query: 365 taagatgcccataatgagtgccatttacaagtgccagacacatgcctggaataccacaga 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 taagatgcccataatgagtgccatttacaagtgccagacacatgcctggaataccacaga 390

                                                                       
Query: 425 catgcatgatctcacttgaatttcaatcacaagggctttttgacatgcatataaagataa 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 catgcatgatctcacttgaatttcaatcacaagggctttttgacatgcatataaagataa 330

                           
Query: 485 caggatgtcatagatt 500
            |||||||||||||||
Sbjct: 329 gaggatgtcatagatt 314


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 500
Length of database: 900
Length adjustment: 10
Effective length of query: 490
Effective length of database: 890
Effective search space:   436100
Effective search space used:   436100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)