Query= MSMg01no088_c16.b1 MSMg01no088_c16.b1 CHROMAT_FILE:
MSMg01no088_c16.b1 PHD_FILE: MSMg01no088_c16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:40:33 2005
(316 letters)
>mm_chr7_110937231_110937946
Length = 716
Score = 580 bits (300), Expect = e-170
Identities = 312/316 (98%)
Strand = Plus / Plus
Query: 1 aaaatgaagtaaatatatccctgtctgcctactacctaactctcaaaaatctgtgtgaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaaatgaagtaaatatatccctgtctgcctactacctaactctcaaaaatctgtgtgaga 260
Query: 61 ttttaaagatctgaactatttgaaataccagattttactgggctctgaagtgaacaagac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttttaaagatctgaactatttgaaataccagattttactgggctctgaagtgaacaagac 320
Query: 121 tactatgtagtcaaattttcttttacaaaagccaacttaagtttctattggaaattagac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tactatgtagtcaaattttcttttacaaaagccaacttaagtttctattggaaattagac 380
Query: 181 aatatacctttatattatcaagttcagaacataagcaaatgatgatagctataaatcaaa 240
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatatacctttgtattatcaagttcagaacataagcaaatgatgatagctataaatcaaa 440
Query: 241 tatttcctatcacattaaagaatgcatagttctttaataaaaataagaaaggtggcttgc 300
||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 441 tatatcctatcacagtaaagaatgcatagttctttaataaaaagaagaaaggtggcttgc 500
Query: 301 tggttacaagttttac 316
||||||||||||||||
Sbjct: 501 tggttacaagttttac 516
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 716
Length adjustment: 9
Effective length of query: 307
Effective length of database: 707
Effective search space: 217049
Effective search space used: 217049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no088_c16.g1 MSMg01no088_c16.g1 CHROMAT_FILE:
MSMg01no088_c16.g1 PHD_FILE: MSMg01no088_c16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:40:33 2005
(582 letters)
>mm_chr7_111033466_111034447
Length = 982
Score = 1036 bits (536), Expect = 0.0
Identities = 566/576 (98%), Gaps = 1/576 (0%)
Strand = Plus / Minus
Query: 1 aacttttcattccagagttcctatcttaattagcatataaggtagctaaggtttaaacaa 60
||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||
Sbjct: 644 aacttttcattccagagttcctatcttaattagcatacaaggtaggtaaggtttaaacaa 585
Query: 61 tttcctcaaagctgtgactttaggttgccatccttagcttatagttttccagttgggtga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 tttcctcaaagctgtgactttaggttgccatccttagcttatagttttccagttgggtga 525
Query: 121 tgctcatctacagggctcttgtaaataaacacagattcggaattataggctcaggttaag 180
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 524 tgctcatctacagggctcttgtaaataaacacagtttcggaattataggctcaggttaag 465
Query: 181 ggaatagtttcagaaaactttgagtgtgaagatatttgaaaattatttagaactatctga 240
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 464 ggaatagtttcagaaaactttgagtgtgaagatgtttgaaaattatttagaactatctga 405
Query: 241 ataatctctggatgatgtttgtgatattctgaggagctgctgaggacacagggcttactg 300
||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||
Sbjct: 404 ataatctctggatgatgtttgtgatattccgaggagctgctgaggacacaggtcttactg 345
Query: 301 ctttgtgagaatcagtgcaaaaaatagctctcagagggggtaaggtgagagtgtatcact 360
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 344 ctttgtgagaatcagtgcaaaaaatagctctcagagggggtaaggtgggagtgtatcact 285
Query: 361 tttagctacatccatgagaacccaataagcttgcctgataatgatatagaattcttccaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 tttagctacatccatgagaacccaataagcttgcctgataatgatatagaattcttccaa 225
Query: 421 ggaactgagtcagtgatattatgagttggaaaccctggaactgaagttacagatgatggt 480
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 ggaactgagttagtgatattatgagttggaaaccctggaactgaagttacagatgatggt 165
Query: 481 gagctactgtctgggtgttggaaactgaattgatgtcctctgtgagagccataattgatt 540
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 164 gagctactgtctgggtgttgaaaactgaattgatgtcctctgtgagagccataattgatt 105
Query: 541 ttaagacatttcttccagccctgcataagtagtgtc 576
|||||||| |||||||||||||||||||||||||||
Sbjct: 104 ttaagaca-ttcttccagccctgcataagtagtgtc 70
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 582
Length of database: 982
Length adjustment: 10
Effective length of query: 572
Effective length of database: 972
Effective search space: 555984
Effective search space used: 555984
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
