Query= MSMg01no088_i21.b1 MSMg01no088_i21.b1 CHROMAT_FILE:
MSMg01no088_i21.b1 PHD_FILE: MSMg01no088_i21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:41:04 2005
(469 letters)
>mm_chr7_13475213_13476081
Length = 869
Score = 843 bits (436), Expect = 0.0
Identities = 454/460 (98%)
Strand = Plus / Minus
Query: 8 attctcttgtgtactgtgagatgtgcgttatggttaaatgacttcccacaatcagtacac 67
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 attctcttgtgcactgtgagatgtgcgttatggttaaatgacttcccacaatcagtacac 608
Query: 68 ttatagtttttaccttgcacctgactttttgtgagttctgtaatgggcataatttgatca 127
|||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 ttatagggtttatcttgcacctgactttttgtgagttctgtaatgggcataatttgatca 548
Query: 128 aaggctttttgactgccattgtcatcaaaggactgtgttgcaggggagtctgtccgttgt 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 aaggctttttgactgccattgtcatcaaaggactgtgttgcaggggagtctgtccgttgt 488
Query: 188 ctaactaagcttggattatgttctgaatttttaacttgtgagtcataagtacagccatac 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 ctaactaagcttggattatgttctgaatttttaacttgtgagtcataagtacagccatac 428
Query: 248 tctcttccagaaatatctggtaatagataagtgtttaagccaagaacacaggcttccaca 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 tctcttccagaaatatctggtaatagataagtgtttaagccaagaacacaggcttccaca 368
Query: 308 agtccaagacttttgtggctttgactttgaagtggtatctctttggggtcattcaagtta 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 agtccaagacttttgtggctttgactttgaagtggtatctctttggggtcattcaagtta 308
Query: 368 ctctgccccttcttgagtgcctgcctctggccatcactttcctgatctatccctatcata 427
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 ctctggtccttcttgagtgcctgcctctggccatcactttcctgatctatccctatcata 248
Query: 428 gaacgacaaggaacagcctttgcaaacccatccttttctg 467
||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 gaacgacaaggaacagcctttgcaaacccatccttttctg 208
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 469
Length of database: 869
Length adjustment: 10
Effective length of query: 459
Effective length of database: 859
Effective search space: 394281
Effective search space used: 394281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no088_i21.g1 MSMg01no088_i21.g1 CHROMAT_FILE:
MSMg01no088_i21.g1 PHD_FILE: MSMg01no088_i21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:41:04 2005
(504 letters)
>mm_chr7_13395102_13396006
Length = 905
Score = 953 bits (493), Expect = 0.0
Identities = 502/505 (99%), Gaps = 1/505 (0%)
Strand = Plus / Plus
Query: 1 ttttctgcgagcaagggaagtc-catctgaaaacaaatcctttgttcacccaaggacagc 59
|||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 201 ttttctgcgagcaagggaagtcacatctgaaaacaaatcctttgttcactcaaggacagc 260
Query: 60 atggcccatgtccattatgtttccgtgggctgctcttcaaggtgtgttctctgatgtcgg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atggcccatgtccattatgtttccgtgggctgctcttcaaggtgtgttctctgatgtcgg 320
Query: 120 gcaagacaccagctccttctaaatattttcccacagtgaggacactggctgggaccctct 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcaagacaccagctccttctaaatattttcccacagtgaggacactggctgggaccctct 380
Query: 180 ctgttatgaagtctctgatgtactaccaggtgagtgttctgtctgaaggactttccacac 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgttatgaagtctctgatgtactaccaggtgagtgttctgtctgaaggactttccacac 440
Query: 240 ttcagacactggtatggagtctccttagtgtgaattctctgatgcttggtcagacaggag 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttcagacactggtatggagtctccttagtgtgaattctctgatgcttggtcagacaggag 500
Query: 300 ctatccctaaaagctttaccacactgattgcactcataaggcccttcaccagtatgaatt 359
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 501 ctatccctaaaagctttaccacactgattgcactcataaggcctttcaccagtatgaatt 560
Query: 360 ctctggtgccggataagtccagcaatgttcctgaagagtttacgacactggttacaaccg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctctggtgccggataagtccagcaatgttcctgaagagtttacgacactggttacaaccg 620
Query: 420 tacggcttctcaccagtgtggaccctctgatgcctgatgagatatgcactctcaatgaaa 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tacggcttctcaccagtgtggaccctctgatgcctgatgagatatgcactctcaatgaaa 680
Query: 480 gttttcccacactctttacattcat 504
|||||||||||||||||||||||||
Sbjct: 681 gttttcccacactctttacattcat 705
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 504
Length of database: 905
Length adjustment: 10
Effective length of query: 494
Effective length of database: 895
Effective search space: 442130
Effective search space used: 442130
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
