Query= MSMg01no090_f23.b1 MSMg01no090_f23.b1 CHROMAT_FILE:
MSMg01no090_f23.b1 PHD_FILE: MSMg01no090_f23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:43:31 2005
(297 letters)
>mm_chr7_123207460_123208157
Length = 698
Score = 561 bits (290), Expect = e-164
Identities = 296/298 (99%), Gaps = 1/298 (0%)
Strand = Plus / Plus
Query: 1 gataaacttgataaaacacagttcaacttttctaaaaaaatctaagatacaacattatag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gataaacttgataaaacacagttcaacttttctaaaaaaatctaagatacaacattatag 260
Query: 61 gaatattttggaatatgatgacaacttaaggttattcagatgttaggttttaaagtcatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaatattttggaatatgatgacaacttaaggttattcagatgttaggttttaaagtcatt 320
Query: 121 atttaacagaaaaaaa-tctatttttcatgaagcaaacggagactgagatcatctggatt 179
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atttaacagaaaaaaaatctatttttcatgaagcaaacggagactgagatcatctggatt 380
Query: 180 tcagcccctgctcattactcacactggatttagaacctgccaatcacgaaaaggttcttc 239
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcagcccctgctcattactcacattggatttagaacctgccaatcacgaaaaggttcttc 440
Query: 240 tctttcaccttttagacagcaataaacttgccaatcagatacccacatttcataattt 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctttcaccttttagacagcaataaacttgccaatcagatacccacatttcataattt 498
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 297
Length of database: 698
Length adjustment: 9
Effective length of query: 288
Effective length of database: 689
Effective search space: 198432
Effective search space used: 198432
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no090_f23.g1 MSMg01no090_f23.g1 CHROMAT_FILE:
MSMg01no090_f23.g1 PHD_FILE: MSMg01no090_f23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:43:31 2005
(229 letters)
>mm_chr7_123308092_123308720
Length = 629
Score = 427 bits (221), Expect = e-124
Identities = 224/225 (99%)
Strand = Plus / Minus
Query: 5 cccatctgtgttggagtgtcttcttctgactccagtgagccattgttctgtcctgagtga 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 cccatctgtgttggagtgtcttcttctgactccagtgagccattgttctgtcctgagtga 370
Query: 65 tggggccgcatgcagaactagggtaggacctgtccttaggaggctttcagtgtggcaggc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 tggggccgcatgcagaactagggtaggacctgtccttaggaggctttcagtgtggcaggc 310
Query: 125 cttgacagaagaaccatgtccagtgtcacagagcccctcctctatcctcagctcacagtt 184
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 309 cttgacagaagaaccatgtccagtgtcacagagtccctcctctatcctcagctcacagtt 250
Query: 185 ttagttgtcaccagtacctctccccaagctggccgggcttgtggg 229
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 ttagttgtcaccagtacctctccccaagctggccgggcttgtggg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 229
Length of database: 629
Length adjustment: 9
Effective length of query: 220
Effective length of database: 620
Effective search space: 136400
Effective search space used: 136400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
