TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCAATGACTATGTAACATGGGCACTCAGAAGAGTTGTAGCAAAGTGAA
ATTAATAGATCTCAAAATTGACCCAAAGAGCAGGGTACATTACTGTGTAC
TTACTGTTTTTGTTTTTCTTCAGAGAACTCTAATTTTATATGCTCAGTTT
TTCCAAAAACTCATTCATTCACATACCAGCGAATTTTAGTTTGCATGTGA
CAATGATTTAACTCATGTGTCTTGAGATTTTAATTGTATCTGAATATTAG
AGGCCTCTCATTCTTCCTCCTCCTCCTTACTTAATTTTTCCTTTTGTTCA
CTCCTTCTTTATTTTTGGAACTTTGAGAAAGAGTTTCATTCTGTAGCCAA
GGATAGTATCAAACATTTAGTAATCATTTTGTTTATATCTCTTGAATGAT
ATGGCTACAAATGTAAGCCAATATACAATGATTTTTTTTCATTTTAAATG
TGCATTTGGCTTTAATCATTAATTATATTTACAATTAATATTTTAGTGAA
AAAGACCAGGCATCATGGCACATATATTTAAGCCATAGGTAGAGAGTGCA
TATTGTGTTTAACTACAGCCAGGATTACCTTTTTGAACCCCGTATTACCA
CTAAAATATAAATAATAAAATTTAAATTATAGTAACCAAAAGAT

NAAACGATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGGGAGTTCCCAAGA
CCTGACACTGTTATTGAGGCTATGGATTACTCAAAAAGGAACCTAGCACA
ACTGCCCCTCCACAAGATACAACTAGTAGCTGAAAGAGACAGATGCAGAT
ATTTGCACCCAACCAATTGATAGAAACACCTGAACCCTGTGGTTGAATTA
GGGAGGGCTGAAAGAAGCAAGGAGAAGGGCCATCCTGTAGGCAGACAAGC
AGTCTCAACTAATCTGGACCCCTGAGAACTCTCAAACACTGGACCACTAA
ACTGACAGCATAAACCAGCTGATATGAGACTCCCAACCCACATACAGTAG
AGAACTTCCAGTTCTGTGTTCATTCAGAGATGATGTACCCAACCCTCTAG
AGACTGGAGACACCAGGGAATTTGAAGGTCAGCTGTGGTGAGGTAGGTGG
ATATCCATGTTGAGACAGGCGGTTAGGGAGGAGGTATTAAATGTGGAAAA
GTCCGAGGCTGGATTACTCTTGGCTCTCTCCTCCTTTTCCTACTCACCCA
TTCTTATCTCTTCTCTTTTCTCATCATTTTTCCCTTCCCTCATTTCCCCT
TTCCCTCTTTACCCCTTCCTTTCTCCCCTTTTCCCCCTTTTCCCCTTCTC
CTC

Query= MSMg01no090_p04.b1 MSMg01no090_p04.b1 CHROMAT_FILE:
MSMg01no090_p04.b1 PHD_FILE: MSMg01no090_p04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:44:17 2005
         (478 letters)



>mm_chr7_67738550_67739427
          Length = 878

 Score =  752 bits (389), Expect = 0.0
 Identities = 454/477 (95%), Gaps = 6/477 (1%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcaatgactatgtaacatgggcactcagaagagttgtagcaaagtgaaattaatag 64
           |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaatgactatgtaacttgggcactgagaagagttgtagcaaagtgaaattaatag 264

                                                                       
Query: 65  atctcaaaattgacccaaagagcagggtacattactgtgtacttactgtttttgtttttc 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atctcaaaattgacccaaagagcagggtacattactgtgtacttactgtttttgtttttc 324

                                                                       
Query: 125 ttcagagaactctaattttatatgctcagtttttccaaaaactcattcattcacatacca 184
           |||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||
Sbjct: 325 ttcagagaactctaattttataggctcagtttttccaaaaactcactcattcacatacca 384

                                                                       
Query: 185 gcgaattttagtttgcatgtgacaatgatttaactcatgtgtcttgagattttaattgta 244
           | ||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||||
Sbjct: 385 gagaattctagtttgcatgtgacagtgatttaactcatgtgtcttgagattttcattgta 444

                                                                       
Query: 245 tctgaatattagag-gcctctcattcttcctc--ctcctccttacttaatttttcctttt 301
           |||||||||||||| || |||| |||||||||  |||||  |||||||||||||||||||
Sbjct: 445 tctgaatattagagtgc-tctcgttcttcctcttctcct--ttacttaatttttcctttt 501

                                                                       
Query: 302 gttcactccttctttatttttggaactttgagaaagagtttcattctgtagccaaggata 361
           ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 502 gttcactccttctttatttttggaactttgagagagagtctcattctgtagccaaggata 561

                                                                       
Query: 362 gtatcaaacatttagtaatcattttgtttatatctcttgaatgatatggctacaaatgta 421
           ||||||||||||||||| |||||||| |||||||||||||||||||||  ||||||||||
Sbjct: 562 gtatcaaacatttagtactcattttgcttatatctcttgaatgatatgattacaaatgta 621

                                                                    
Query: 422 agccaatatacaatgattttttttcattttaaatgtgcatttggctttaatcattaa 478
           ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||
Sbjct: 622 agccaatatacaatgcttttttttcattttaaatgtgcattaggctttaatcattaa 678


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 478
Length of database: 878
Length adjustment: 10
Effective length of query: 468
Effective length of database: 868
Effective search space:   406224
Effective search space used:   406224
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)