Query= MSMg01no090_p12.b1 MSMg01no090_p12.b1 CHROMAT_FILE:
MSMg01no090_p12.b1 PHD_FILE: MSMg01no090_p12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:44:18 2005
(314 letters)
>mm_chr7_29605999_29606713
Length = 715
Score = 571 bits (295), Expect = e-167
Identities = 307/311 (98%), Gaps = 1/311 (0%)
Strand = Plus / Plus
Query: 5 gaattctcttactcgctactctcttgcaccagatctgcgatgaactgggagtgaagcggc 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctcttactcgttactctcttgcaccagatctgcgatgaactgggagtgaagcggc 264
Query: 65 caacctctgtccac-tattttcaggcaaaagtgagtcagacaccacttccctccccgacc 123
||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 caacctctgtcaaagtattttcaggcaaaagtgagtcagacaccacttccctccccgacc 324
Query: 124 ccactgcagctgtgggtggtggttgctgggaggagactaaccttgtgtggccctgcctaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ccactgcagctgtgggtggtggttgctgggaggagactaaccttgtgtggccctgcctaa 384
Query: 184 cccctctgctgtctcctgtttgattcaggcgagcggagctcctctgggctgctggagtgg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cccctctgctgtctcctgtttgattcaggcgagcggagctcctctgggctgctggagtgg 444
Query: 244 gactcgaagagcgatgccctggagaccttgggcttcctgaaccattaccagatgaaaaac 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gactcgaagagcgatgccctggagaccttgggcttcctgaaccattaccagatgaaaaac 504
Query: 304 ccaagtgagtg 314
|||||||||||
Sbjct: 505 ccaagtgagtg 515
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 715
Length adjustment: 9
Effective length of query: 305
Effective length of database: 706
Effective search space: 215330
Effective search space used: 215330
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no090_p12.g1 MSMg01no090_p12.g1 CHROMAT_FILE:
MSMg01no090_p12.g1 PHD_FILE: MSMg01no090_p12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:44:18 2005
(286 letters)
>mm_chr7_29766198_29766883
Length = 686
Score = 497 bits (257), Expect = e-145
Identities = 278/285 (97%)
Strand = Plus / Minus
Query: 1 cgctggagggcgctctctggccaagcggggtggagaagacggggaaccacccaggggtgg 60
||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 485 cgctgaagggcgctctctggccaagcggggtggagaagacggggagccagccaggggtgg 426
Query: 61 ccagggctccccgctcctccagagatggagtttctccaagtttctctccgtccctcaact 120
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 ccagggctccacgctcctccagagatggagtttctccaagtttctctccgtccctcaact 366
Query: 121 ttaccttttctgctgccacagactcccggtgtcttttagtctcttccttctctgtccttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 ttaccttttctgctgccacagactcccggtgtcttttagtctcttccttctctgtccttg 306
Query: 181 tggaccatcctacatagtgttttctgatgtctatttggccagtggggaccggaggtgatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 tggaccatcctacatagtgttttctgatgtctatttggccagtggggaccggaggtgatg 246
Query: 241 gaaacggtaaccggtcctgcgttcctggacgaaggttcccattcc 285
||||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 245 gaaacgggaaccggtcctgcgttcctggacttaggttcccattcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
