Query= MSMg01no092_l10.b1 MSMg01no092_l10.b1 CHROMAT_FILE:
MSMg01no092_l10.b1 PHD_FILE: MSMg01no092_l10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:46:40 2005
(375 letters)
>mm_chr7_17418855_17419629
Length = 775
Score = 700 bits (362), Expect = 0.0
Identities = 368/370 (99%), Gaps = 1/370 (0%)
Strand = Plus / Plus
Query: 1 cctagtctacagagtgagttccaggacagccagggctacacagagaaaccctgtcttg-a 59
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 200 cctagtctacagagtgagttccaggacagccagggctacacagagaaaccctgtcttgaa 259
Query: 60 aaaacaaaaacaaaacaaaacaaaaagctaggagaaatcctcaagctcccgtgagcaagg 119
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 260 aaaacaaaaacaaaacaaaactaaaagctaggagaaatcctcaagctcccgtgagcaagg 319
Query: 120 aaggcttgagccttagctgccttgcatcgcctctcccttgcaccctgcaggggcccggtg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aaggcttgagccttagctgccttgcatcgcctctcccttgcaccctgcaggggcccggtg 379
Query: 180 ctggcagtcaccatgggcagcaacagcgagtactgttacagtggtggggctgatgccagg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ctggcagtcaccatgggcagcaacagcgagtactgttacagtggtggggctgatgccagg 439
Query: 240 atccacagctggaagattcctgacctcaacatggacccatatgatggctatggtgaggac 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 atccacagctggaagattcctgacctcaacatggacccatatgatggctatggtgaggac 499
Query: 300 agaccctgccactccctcctcctgtcacagctctgggaagtagcactgtaagcttcctgg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 agaccctgccactccctcctcctgtcacagctctgggaagtagcactgtaagcttcctgg 559
Query: 360 tctgacttaa 369
||||||||||
Sbjct: 560 tctgacttaa 569
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 375
Length of database: 775
Length adjustment: 9
Effective length of query: 366
Effective length of database: 766
Effective search space: 280356
Effective search space used: 280356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no092_l10.g1 MSMg01no092_l10.g1 CHROMAT_FILE:
MSMg01no092_l10.g1 PHD_FILE: MSMg01no092_l10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:46:40 2005
(459 letters)
>mm_chr7_17562207_17563065
Length = 859
Score = 760 bits (393), Expect = 0.0
Identities = 415/423 (98%), Gaps = 2/423 (0%)
Strand = Plus / Minus
Query: 1 tggccttggaaggcagagagagaagatccgtggagcaagctgattacagagactattggt 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 554 tggccttggaaggcagagagagaagatccgtggagcaagctgattacagacactattggt 495
Query: 61 cagctctgggtttgattgagaggcacttactcaatgaataaggtaaaaagtgatagaggg 120
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 494 cagctctgggtttgattgagaggcacttactcaatgaataagataaaaagtgatagaggg 435
Query: 121 tgattcctgacatcaacttcctgcttccacgtgcacatgtacacacacatccacatggca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 tgattcctgacatcaacttcctgcttccacgtgcacatgtacacacacatccacatggca 375
Query: 181 atatgcatacacaaatccaggcccattacacatagagaaaaatgtatatgtctagacatt 240
|||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 374 atatgcatacacaaatccaggcccatcacacacagagaaaaatgtatatgtctagacatt 315
Query: 241 gacatatatgcatcttatttcatttcagaaaatatacataccacctagcacatgaattca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 gacatatatgcatcttatttcatttcagaaaatatacataccacctagcacatgaattca 255
Query: 301 tttctttgcttagcaatcctctggggtaactgctcttacattgttattcccatcttttaa 360
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 254 tttctttgcttagcaatcctctggggtaaccgctcttacattgttattcccatcttttaa 195
Query: 361 aaaatttattatttttaat--aaatagggattttacctgattcacaaatgtatgcctctg 418
||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 194 aaaatttattatttttaataaaaataggggttttacctgattcacaaatgtatgcctctg 135
Query: 419 tga 421
|||
Sbjct: 134 tga 132
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 459
Length of database: 859
Length adjustment: 10
Effective length of query: 449
Effective length of database: 849
Effective search space: 381201
Effective search space used: 381201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
