Query= MSMg01no095_g04.b1 MSMg01no095_g04.b1 CHROMAT_FILE:
MSMg01no095_g04.b1 PHD_FILE: MSMg01no095_g04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:51:23 2005
(294 letters)
>mm_chr7_89213358_89214051
Length = 694
Score = 569 bits (294), Expect = e-167
Identities = 294/294 (100%)
Strand = Plus / Plus
Query: 1 gcgagggttgagcaagtggtgactcgaggctgcagcacatgccttggcacttgtttgcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gcgagggttgagcaagtggtgactcgaggctgcagcacatgccttggcacttgtttgcac 260
Query: 61 caactgagaacttggtctccttccttttcccagattcctttactcgggcattgaaggacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caactgagaacttggtctccttccttttcccagattcctttactcgggcattgaaggacc 320
Query: 121 agagtccaggaaatggctcagcgggctggtaatgtatggttactgccaagcctgattatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agagtccaggaaatggctcagcgggctggtaatgtatggttactgccaagcctgattatc 380
Query: 181 agggctttagtttgactctggagaattatcttctgacctctatctacaggtacactgggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agggctttagtttgactctggagaattatcttctgacctctatctacaggtacactgggg 440
Query: 241 cacttgtgactcccacaataaaaaaggaaagaaatgtcattttaaaagaagaga 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cacttgtgactcccacaataaaaaaggaaagaaatgtcattttaaaagaagaga 494
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 694
Length adjustment: 9
Effective length of query: 285
Effective length of database: 685
Effective search space: 195225
Effective search space used: 195225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no095_g04.g1 MSMg01no095_g04.g1 CHROMAT_FILE:
MSMg01no095_g04.g1 PHD_FILE: MSMg01no095_g04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:51:23 2005
(295 letters)
>mm_chr7_89386643_89387339
Length = 697
Score = 513 bits (265), Expect = e-150
Identities = 288/297 (96%), Gaps = 4/297 (1%)
Strand = Plus / Minus
Query: 2 agggatggaacctgagttgtcacaattgtgcggtgaggatgcttccctcgctgagccaac 61
||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||| |
Sbjct: 497 agggatggaacctgagttgtcacaactgtgcggtgagggtgcttccct-gctgagccagc 439
Query: 62 tccatggccccaagaaccttcattttatataaaaatgcacattaaccagtctttgacata 121
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 438 tccatggccccaagaaccttcattttatataaaaatgcacattagccagtctttgacata 379
Query: 122 ggtagctcctttaacatagac---gttttatagatttgagataatactgaaaactaggaa 178
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 378 ggtagctcctttaacatagacagtgttttatagatttgagataatactgaaaactaggaa 319
Query: 179 atgtgaaatattaacactggcttagctatatgctaggcaaagcccctctattccctccct 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 atgtgaaatattaacactggcttagctatatgctaggcaaagcccctctattccctccct 259
Query: 239 gaggtaatcagtctcagacaattctctcttctgtctttttctcgtttggttttgggg 295
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 gatgtaatcagtctcagacaattctctcttctgtctttttctcgtttggttttgggg 202
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 295
Length of database: 697
Length adjustment: 9
Effective length of query: 286
Effective length of database: 688
Effective search space: 196768
Effective search space used: 196768
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
