Query= MSMg01no095_j22.b1 MSMg01no095_j22.b1 CHROMAT_FILE:
MSMg01no095_j22.b1 PHD_FILE: MSMg01no095_j22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:51:42 2005
(495 letters)
>mm_chr7_145497638_145498532
Length = 895
Score = 833 bits (431), Expect = 0.0
Identities = 473/487 (97%), Gaps = 2/487 (0%)
Strand = Plus / Minus
Query: 10 gaattctttgattctcgaattttccattgaatattttcagactcaagttggacataggcg 69
||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 790 gaattctttgagtctggaattttccattgaatattttcagactcaagttggacataggtg 731
Query: 70 aactgaagctaacacg-agcaaaactagagatcaggatcatcttgtgttcggggcaaccc 128
|||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 aactgaagctaaga-gtagcaaaactagagatcaggatcatcttgtgttcggggcaaccc 672
Query: 129 tatagagaaaggattgtggggcactctggtcatggtgtctccatgggcagctgaggtacc 188
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 671 tatagagaaaggattgtggggcactctggtcatggtgtctccaggggcagctgaggtacc 612
Query: 189 cagagactcggcatagctgaaggaggagaaaagttttttctgatgcttccctgtgtgaac 248
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 611 cagagactcggcatagctgaaggaagagaaaagttttttctgatgcttccctgtgtgaac 552
Query: 249 ccacaggggtgtattgcacaaaccttagacttgcctcattttacaatttggaataagtag 308
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 551 ccacaggggtgtattgcacaaaccttagacttgcctcattttacaatttggagtaagtag 492
Query: 309 agatgtctaggggtccactggacttctcagcaatagtgaagaaaggactttgcttaggag 368
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 agatgtctaggggcccactggacttctcagcaatagtgaagaaaggactttgcttaggag 432
Query: 369 cccattgatctggtgactggagggtttatggctctgacacatagctctgccatcagagcc 428
||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 431 cccattgttctggtgactggaaggtttatggctctgacacatagctctgccatcagagcc 372
Query: 429 ataggctgtgcctctcatgctctggggtgtgtctgcttcttggtctctatcctactttcc 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 371 gtaggctgtgcctctcatgctctggggtgtgtctgcttcttggtctctatcctactctcc 312
Query: 489 atggtag 495
|||||||
Sbjct: 311 atggtag 305
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 495
Length of database: 895
Length adjustment: 10
Effective length of query: 485
Effective length of database: 885
Effective search space: 429225
Effective search space used: 429225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no095_j22.g1 MSMg01no095_j22.g1 CHROMAT_FILE:
MSMg01no095_j22.g1 PHD_FILE: MSMg01no095_j22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:51:42 2005
(247 letters)
>mm_chr7_145386470_145387116
Length = 647
Score = 431 bits (223), Expect = e-125
Identities = 241/247 (97%)
Strand = Plus / Plus
Query: 1 catatataaacctaagcacaggtagaatcagagcatacttcttagccaatgtgtctcggg 60
||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 201 catatataaacctaagcacaggtagaaccagagcatacttcttagccaatgcctctcggg 260
Query: 61 actcagagggaaacaggaagctttcggggtacctgagaagctctaggctccctgaaactt 120
|||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 261 actcagagggaaacaggaagcttttggggtacctgaaaagctctaggctccctgaaactt 320
Query: 121 gtagccacagctcactgtgttcacagatcagagttaaagtggatctgagacctaagtgta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtagccacagctcactgtgttcacagatcagagttaaagtggatctgagacctaagtgta 380
Query: 181 aatagaggacttgtgcaaacatcaggaaaaggaacagtgggtttctctaaaacctggata 240
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatagaggacatgtgcaaacatcaggaaaaggaacagtgggtttctctaaaacctggata 440
Query: 241 tggcaag 247
|||||||
Sbjct: 441 tggcaag 447
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 247
Length of database: 647
Length adjustment: 9
Effective length of query: 238
Effective length of database: 638
Effective search space: 151844
Effective search space used: 151844
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
