Query= MSMg01no095_n07.b1 MSMg01no095_n07.b1 CHROMAT_FILE:
MSMg01no095_n07.b1 PHD_FILE: MSMg01no095_n07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:51:58 2005
(445 letters)
>mm_chr7_25076129_25076974
Length = 846
Score = 613 bits (317), Expect = e-180
Identities = 323/325 (99%), Gaps = 1/325 (0%)
Strand = Plus / Minus
Query: 7 gaattcagtcgcccttcgag-cttcaggcccatcagggcattcacaccggagagaaatca 65
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gaattcagtcgcccttcgagtcttcaggcccatcagggcattcacaccggagagaaatca 266
Query: 66 tacgtttgtactatgtgtgggaaaggctatactctgaattcaaatctccaagtccacttg 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tacgtttgtactatgtgtgggaaaggctatactctgaattcaaatctccaagtccacttg 206
Query: 126 agagtccacacaggggagaagccgtacagttgtgacgtgtgtgggaaaggcttcagtcgc 185
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 agagtccacacgggggagaagccgtacagttgtgacgtgtgtgggaaaggcttcagtcgc 146
Query: 186 tcttcacagctacagtcccatcagagagtccacacgggggagaagccttacaagtgtgat 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 tcttcacagctacagtcccatcagagagtccacacgggggagaagccttacaagtgtgat 86
Query: 246 gtgtgtggtaagagctttggttggcggtcaaatcttataattcatcacagaatccacagc 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 gtgtgtggtaagagctttggttggcggtcaaatcttataattcatcacagaatccacagc 26
Query: 306 agtggtaaaccttacaagagcaaga 330
|||||||||||||||||||||||||
Sbjct: 25 agtggtaaaccttacaagagcaaga 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 445
Length of database: 846
Length adjustment: 10
Effective length of query: 435
Effective length of database: 836
Effective search space: 363660
Effective search space used: 363660
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no095_n07.g1 MSMg01no095_n07.g1 CHROMAT_FILE:
MSMg01no095_n07.g1 PHD_FILE: MSMg01no095_n07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:51:58 2005
(541 letters)
>mm_chr7_24927964_24928905
Length = 942
Score = 855 bits (442), Expect = 0.0
Identities = 519/548 (94%), Gaps = 8/548 (1%)
Strand = Plus / Plus
Query: 1 attgaggaaagagctttttattgtaatcactactgcaaatgtttttgcacagtatttgct 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 attgaggaaagagctttttattgtaatcactactgcaaatgtttttgcaaagtatttgct 260
Query: 61 gatgacaaaaaggttcttaataaacttgaattattaatgagttgtttctcatcctttccc 120
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gatgacataaaggttcttaataaacttgaattattaatgagttgtttctcatcctttccc 320
Query: 121 t-caatcttggatcagattgtcctccctgaccagagttgctctgatcttctgccctgaat 179
| |||||| || ||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 321 tccaatctcgggtcagattgtcctccctgaccagagttgttctgatcttctgccctgaat 380
Query: 180 ttttagacttatctgtgctgttcccaccggttctccgaggttgtatttcagataaagaac 239
||||||||||||||||||| ||||||| |||||||| |||||||||||||||||||||||
Sbjct: 381 ttttagacttatctgtgctattcccacgggttctccaaggttgtatttcagataaagaac 440
Query: 240 agagtcattgtttacacctccagagctctgaagagcaagggtccaggaggctgctactgt 299
||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 441 agagtcattgtttacacatccagagctctgaagagcaagggtccaggaggatgctactgt 500
Query: 300 gacatctgatagcaaggggtgtgcaggaatgatgcaggaagggcttgacatcccggtgtc 359
||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 501 gacatctgatagcaaggtgtgtgcaggaatgatgcaggaagggctagacatcccggtgtc 560
Query: 360 cacacagtgagttccaggacagccagggctacacagagaaaccctgccaccggtggaaaa 419
|||||||||| |||||| ||| ||||||||||||||||||||||||| || | || ||||
Sbjct: 561 cacacagtgatttccagaacaaccagggctacacagagaaaccctgcaacagatgaaaaa 620
Query: 420 aaaaaa------ggcaggagggtcatgaatttgaggccagcctgggcttcaaagtgagac 473
|||||| ||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 621 aaaaaaaaaaaaggcaggagggtcatgaatttgaggccagcctgggcttcaaagtaagac 680
Query: 474 tctggctcaacaactgtaaaagattatgctcaacatagttaaaaactgtatcagagactt 533
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 681 tctggctcaacaactgtaaaagattatgctcaacatagttgaaaactgtatcagagactt 740
Query: 534 ttcaattg 541
| ||||||
Sbjct: 741 t-caattg 747
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 541
Length of database: 942
Length adjustment: 10
Effective length of query: 531
Effective length of database: 932
Effective search space: 494892
Effective search space used: 494892
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
