Query= MSMg01no096_e13.b1 MSMg01no096_e13.b1 CHROMAT_FILE:
MSMg01no096_e13.b1 PHD_FILE: MSMg01no096_e13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:52:35 2005
(244 letters)
>mm_chr7_127272763_127273409
Length = 647
Score = 447 bits (231), Expect = e-130
Identities = 242/247 (97%), Gaps = 3/247 (1%)
Strand = Plus / Minus
Query: 1 tatggctggatgaggcaggttggcaatcactaagtcctagta---aagaaacaggagacc 57
||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 447 tatggctggatgaggcaggttagcaatcactaagtcctagtaaagaagaaacaggagacc 388
Query: 58 tgggctctgaagaagatatgacactgatagccaccatctaagtgctgcagggttacaagc 117
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 387 tgggctctgaagaagatatgacactgatagccaccatctaagtgctgcagggttacgagc 328
Query: 118 caaggagcccaggtagcctctaacagaggaacaggtgaggaaccgtggtggagccttcag 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 caaggagcccaggtagcctctaacagaggaacaggtgaggaaccgtggtggagccttcag 268
Query: 178 aatcagctctactgcccctgtttgcacttctgagtttgcctccagagtactaactactaa 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 aatcagctctactgcccctgtttgcacttctgagtttgcctccagagtactaactactaa 208
Query: 238 gtttatg 244
|||||||
Sbjct: 207 gtttatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 647
Length adjustment: 9
Effective length of query: 235
Effective length of database: 638
Effective search space: 149930
Effective search space used: 149930
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no096_e13.g1 MSMg01no096_e13.g1 CHROMAT_FILE:
MSMg01no096_e13.g1 PHD_FILE: MSMg01no096_e13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:52:35 2005
(258 letters)
>mm_chr7_127122899_127123556
Length = 658
Score = 485 bits (251), Expect = e-142
Identities = 254/255 (99%)
Strand = Plus / Plus
Query: 1 ttctctgagcctggaccctttaatcattttgtcataactgatcctttggtggggcaaagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttctctgagcctggaccctttaatcattttgtcataactgatcctttggtggggcaaagc 260
Query: 61 aagggggtagaaaggtgtatattacatgtagaggtctccttgtatcatgtctagtttgga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagggggtagaaaggtgtatattacatgtagaggtctccttgtatcatgtctagtttgga 320
Query: 121 aaggagtaatgaccttgagatgctgtgttgtataacatcaggaaacaaggcctggtgtgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaggagtaatgaccttgagatgctgtgttgtataacatcaggaaacaaggcctggtgtgg 380
Query: 181 tggtgtataggtgtagaggtctccttgtatcatgtctagtttggaaaggagtaatgacct 240
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tggtgtagaggtgtagaggtctccttgtatcatgtctagtttggaaaggagtaatgacct 440
Query: 241 tgagatgctgtgttg 255
|||||||||||||||
Sbjct: 441 tgagatgctgtgttg 455
Score = 184 bits (95), Expect = 5e-51
Identities = 98/99 (98%)
Strand = Plus / Plus
Query: 87 tgtagaggtctccttgtatcatgtctagtttggaaaggagtaatgaccttgagatgctgt 146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tgtagaggtctccttgtatcatgtctagtttggaaaggagtaatgaccttgagatgctgt 451
Query: 147 gttgtataacatcaggaaacaaggcctggtgtggtggtg 185
|||| ||||||||||||||||||||||||||||||||||
Sbjct: 452 gttgaataacatcaggaaacaaggcctggtgtggtggtg 490
Score = 130 bits (67), Expect = 1e-34
Identities = 67/67 (100%)
Strand = Plus / Plus
Query: 192 tgtagaggtctccttgtatcatgtctagtttggaaaggagtaatgaccttgagatgctgt 251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 tgtagaggtctccttgtatcatgtctagtttggaaaggagtaatgaccttgagatgctgt 346
Query: 252 gttgtat 258
|||||||
Sbjct: 347 gttgtat 353
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 3
Length of query: 258
Length of database: 658
Length adjustment: 9
Effective length of query: 249
Effective length of database: 649
Effective search space: 161601
Effective search space used: 161601
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
