Query= MSMg01no100_a18.b1 MSMg01no100_a18.b1 CHROMAT_FILE:
MSMg01no100_a18.b1 PHD_FILE: MSMg01no100_a18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:57:47 2005
(245 letters)
>mm_chr7_31400121_31400765
Length = 645
Score = 393 bits (203), Expect = e-114
Identities = 233/249 (93%), Gaps = 12/249 (4%)
Strand = Plus / Minus
Query: 1 tggcccttggatgggatctcttagatccctgcctaggggcggatcattaactactgctca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 tggcccttggatgggatctcttagatccctgcctaggggcggatcattaactactgctca 290
Query: 61 tagcctcctgtgtttgtaacaagattagacaatgagaactgccttcttggtcctgggatt 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 aagcctcctgtgtttgtaacaagattagacaatgagaactgccttcttggtcctgggatt 230
Query: 121 gaactcagagccacccacaggttagcaacagccccaccttcagcctctcactgatagtta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 gaactcagagccacccacaggttagcaacagccccaccttcagcctctcactgatagtta 170
Query: 181 ctaggcagtgactctaccactgagccac-------gcccc-c----agctcctcactggg 228
|||||||||| |||| |||||||||||| ||||| | ||| ||||||||||
Sbjct: 169 ctaggcagtggctctcccactgagccacacccctagcccctcccctagcccctcactggg 110
Query: 229 ggattctag 237
|||||||||
Sbjct: 109 ggattctag 101
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no100_a18.g1 MSMg01no100_a18.g1 CHROMAT_FILE:
MSMg01no100_a18.g1 PHD_FILE: MSMg01no100_a18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:57:47 2005
(120 letters)
>mm_chr7_31219919_31220438
Length = 520
Score = 217 bits (112), Expect = 2e-61
Identities = 118/120 (98%)
Strand = Plus / Plus
Query: 1 aaaataaattaaggtgaagaggtcccttgtgggacaggagctggggatttctaagggtgt 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 201 aaaataaattaaggtgaagaggtcctttgtgggacaggagctggggatttctaagggtgt 260
Query: 61 ggaatttggaactaggaaggggaaacaagaatgaatttgccaagatctccctcccccacc 120
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 261 ggaatttggaactaggaaggggaaacaagaatgaatttgtcaagatctccctcccccacc 320
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 120
Length of database: 520
Length adjustment: 8
Effective length of query: 112
Effective length of database: 512
Effective search space: 57344
Effective search space used: 57344
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
