Query= MSMg01no101_m12.b1 MSMg01no101_m12.b1 CHROMAT_FILE:
MSMg01no101_m12.b1 PHD_FILE: MSMg01no101_m12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:00:07 2005
(201 letters)
>mm_chr7_78759267_78759867
Length = 601
Score = 381 bits (197), Expect = e-110
Identities = 201/203 (99%), Gaps = 2/203 (0%)
Strand = Plus / Minus
Query: 1 gtggttcagagagcccatctccatctttaggaattcctcaacccacacagaccagcactc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gtggttcagagagcccatctccatctttaggaattcctcaacccacacagaccagcactc 250
Query: 61 agccttctcacagcaatgaattcccaatggggtctggcagagcctttttcctctcccctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 agccttctcacagcaatgaattcccaatggggtctggcagagcctttttcctctcccctt 190
Query: 121 ccctcccctcccctctccctctctctccctctccctctccctctccctctccctc--cct 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 189 ccctcccctcccctctccctctctctccctctccctctccctctccctctccctctccct 130
Query: 179 ctccctctccctctccctctccc 201
|||||||||||||||||||||||
Sbjct: 129 ctccctctccctctccctctccc 107
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 46
Number of extensions: 18
Number of successful extensions: 18
Number of sequences better than 10.0: 1
Number of HSP's gapped: 15
Number of HSP's successfully gapped: 1
Length of query: 201
Length of database: 601
Length adjustment: 8
Effective length of query: 193
Effective length of database: 593
Effective search space: 114449
Effective search space used: 114449
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no101_m12.g1 MSMg01no101_m12.g1 CHROMAT_FILE:
MSMg01no101_m12.g1 PHD_FILE: MSMg01no101_m12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:00:07 2005
(511 letters)
>mm_chr7_78710268_78711179
Length = 912
Score = 922 bits (477), Expect = 0.0
Identities = 498/505 (98%), Gaps = 1/505 (0%)
Strand = Plus / Plus
Query: 1 agattcatcaattaactctaatgagtgtctatatcttccctgtacctctgacttcaactt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agattcatcaattaactctaatgagtgtctatatcttccctgtacctctgacttcaactt 260
Query: 61 tagtgtttccatatttttgtatttctctgtttattctatttagaataaataattacgttg 120
||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 261 tagtgtttccatatttttgtatttctctgtttattgtatttagaataaataattaagttg 320
Query: 121 gaagtttctcctattaatttttaataatgaataagtctagtatctaggaattttcttctg 180
|||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 321 gaagtttcccctattaatttttaataatgaataagtctagtatctagaaattttcttctg 380
Query: 181 atcattgattgaaatgcacatcataattctgataagtaatatctttttatttttaaatct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atcattgattgaaatgcacatcataattctgataagtaatatctttttatttttaaatct 440
Query: 241 gcagtggttttagacacacatttt-cagcttatatttttctcttctgttaagaactgtaa 299
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 441 gcagtggttttagacacacatttttcagcttatatttttctcttctgttaagaactgtaa 500
Query: 300 aataacaacatccccaagtcaaaaattccttataaaaatatgaaactggaaagataagaa 359
|||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||
Sbjct: 501 aataacaacatccccaagccaaaaattccttgtaaaaatatgaaactggaaagataagaa 560
Query: 360 tacaagtctctaatttttttaggtcaaaatatcagttatattagcaaaagtaacagctgt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tacaagtctctaatttttttaggtcaaaatatcagttatattagcaaaagtaacagctgt 620
Query: 420 gcatcttctctcatctaaagcaacaccatgtgataaaataatatcataatcaaaaattca 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gcatcttctctcatctaaagcaacaccatgtgataaaataatatcataatcaaaaattca 680
Query: 480 atgagaaagtgaagaacaagaacaa 504
|||||||||||||||||||||||||
Sbjct: 681 atgagaaagtgaagaacaagaacaa 705
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 511
Length of database: 912
Length adjustment: 10
Effective length of query: 501
Effective length of database: 902
Effective search space: 451902
Effective search space used: 451902
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
