Query= MSMg01no102_d05.b1 MSMg01no102_d05.b1 CHROMAT_FILE:
MSMg01no102_d05.b1 PHD_FILE: MSMg01no102_d05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:00:43 2005
(245 letters)
>mm_chr7_129844620_129845264
Length = 645
Score = 427 bits (221), Expect = e-124
Identities = 239/245 (97%)
Strand = Plus / Minus
Query: 1 caggacctaacacgtagccctcaaaacacataaatccattcctctctcccctttaagtta 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 caggacctaacacttagccctcaaaacacataaatccattcctctctcccctttaagtta 251
Query: 61 aatttccgttaagtgtggttgaatttgactatcaagtttcccaactttcaagcctggtgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 aatttccgttaagtgtggttgaatttgactatcaagtttcccaactttcaagcctggtgt 191
Query: 121 ggtggcgcacgcctttaatccaagcactcgggaggcagaggcatgcagatttctgagttt 180
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 ggtggcgcacgtctttaatccaagcactcgggaggcagaggcatgcagatttctgagttt 131
Query: 181 gaggtcacaacaaagtgagttccaggacagccagggttatacagagaaaccctgtctcaa 240
|||| |||||||||||||||||||||| |||||||| |||||||||||||| ||||||||
Sbjct: 130 gaggccacaacaaagtgagttccaggatagccagggctatacagagaaaccttgtctcaa 71
Query: 241 acaaa 245
|||||
Sbjct: 70 acaaa 66
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no102_d05.g1 MSMg01no102_d05.g1 CHROMAT_FILE:
MSMg01no102_d05.g1 PHD_FILE: MSMg01no102_d05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:00:43 2005
(375 letters)
>mm_chr7_129672137_129672915
Length = 779
Score = 658 bits (340), Expect = 0.0
Identities = 367/378 (97%), Gaps = 4/378 (1%)
Strand = Plus / Plus
Query: 2 gaattctgaatttgggtccgttgtgggtctggactgttctcaagtagactgacaatgggg 61
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 202 gaattctgaatttgggtccgttgtgggtctggactgttctcaagtagactgactatgggg 261
Query: 62 gactctacaaaagtgcttgcgggcagatgctctcaagtaat----cattttgtccaaccc 117
||||||||||||| || || |||||||||||| |||||||| |||||||||||||||
Sbjct: 262 gactctacaaaagcgcctgtgggcagatgctcacaagtaatcatccattttgtccaaccc 321
Query: 118 atggggctgggtgtgaccttggactctgctgctgttgcttcctacttcagataagttcct 177
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 atgggtctgggtgtgaccttggactctgctgctgttgcttcctacttcagataagttcct 381
Query: 178 tttctgtctttgggaccagggcccctgtcatagttagggtttcattgctgtgaagggaca 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 tttctgtctttgggaccagggcccctgtcatagttagggtttcattgctgtgaagggaca 441
Query: 238 ccatgaccaaggtaactcttataaaggaaaatatttgattggggctggcttacagtttca 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ccatgaccaaggtaactcttataaaggaaaatatttgattggggctggcttacagtttca 501
Query: 298 gaggttcagcccattatcatcatggtgggaagcatgctggtgtgtggacagacacggagc 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 502 gaggttcagcccattatcatcatggtgggaagcatgctggtgtgtggacagacacggtgc 561
Query: 358 tgggggtgtggtggtggt 375
||||||||||||||||||
Sbjct: 562 tgggggtgtggtggtggt 579
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 375
Length of database: 779
Length adjustment: 9
Effective length of query: 366
Effective length of database: 770
Effective search space: 281820
Effective search space used: 281820
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
