Query= MSMg01no102_e04.b1 MSMg01no102_e04.b1 CHROMAT_FILE:
MSMg01no102_e04.b1 PHD_FILE: MSMg01no102_e04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:00:48 2005
(441 letters)
>mm_chr7_126601634_126602473
Length = 840
Score = 845 bits (437), Expect = 0.0
Identities = 440/441 (99%), Gaps = 1/441 (0%)
Strand = Plus / Minus
Query: 1 gtcttctgccacctgtgcagggactttgcaaatattgctcttggacactccacagcactg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 gtcttctgccacctgtgcagggactttgcaaatattgctcttggacactccacagcactg 391
Query: 61 acccccccttttgctagcttgctattgatttcttcttggaaagcccctattcccatccca 120
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 a-ccccccttttgctagcttgctattgatttcttcttggaaagcccctattcccatccca 332
Query: 121 ctccatttctgtatgtcatgccaatagtttgggttctgagaacctggacctattgccata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 ctccatttctgtatgtcatgccaatagtttgggttctgagaacctggacctattgccata 272
Query: 181 tgttggtcatgtatgtccatatttgcagagacacagctgtataaatattgtttggattat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 tgttggtcatgtatgtccatatttgcagagacacagctgtataaatattgtttggattat 212
Query: 241 atactcctttctttctttttttattagatattttctttatttacatttcaaatattatcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 atactcctttctttctttttttattagatattttctttatttacatttcaaatattatcc 152
Query: 301 cctttcctagtttccccaccaaaaatcccctccccctccccctgttccccaacccaccca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 cctttcctagtttccccaccaaaaatcccctccccctccccctgttccccaacccaccca 92
Query: 361 ctcccattcctggtcctggcattcccctatactgggacaaagaaaccttcacaggagcaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91 ctcccattcctggtcctggcattcccctatactgggacaaagaaaccttcacaggagcaa 32
Query: 421 gggcctctcctcccattgatg 441
|||||||||||||||||||||
Sbjct: 31 gggcctctcctcccattgatg 11
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 441
Length of database: 840
Length adjustment: 9
Effective length of query: 432
Effective length of database: 831
Effective search space: 358992
Effective search space used: 358992
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no102_e04.g1 MSMg01no102_e04.g1 CHROMAT_FILE:
MSMg01no102_e04.g1 PHD_FILE: MSMg01no102_e04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:00:48 2005
(412 letters)
>mm_chr7_126489982_126490797
Length = 816
Score = 723 bits (374), Expect = 0.0
Identities = 405/416 (97%), Gaps = 4/416 (0%)
Strand = Plus / Plus
Query: 1 aattctaaccactgtggtttggttccaa-gacccc-tcattggggtgatgcattgcggat 58
|||||||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||
Sbjct: 201 aattctaaccactgtggtttggttccaaagaccccctcattggggtgatgcattggggat 260
Query: 59 gtattggaagccttgtgtgttgtgggggg--cacctgtgaaactgtcctgtatacgagtg 116
|||||| ||||||||||||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 261 gtattgaaagccttgtgtgttggggggggggcacctgtgaaactgtcctgtatacgagtg 320
Query: 117 gttttgctttgctgtgtattcccaccatgatgtactgtctcagcacagactcaagtcagt 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gttttgctttgctgtgtattcccaccatgatgtactgtctcagcacagactcaagtcagt 380
Query: 177 ggagccaactcttcatggagtggatgttctaaaatcgtgagctaaagtcaaactttttac 236
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 381 ggagccaactcttcatggagtggacgttctaaaatcgtgagctaaagtcaaactttttac 440
Query: 237 tttataagttgacaatctctagtattttgctatttaacagaaagctgtttattgcaacta 296
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttataagttgacaatctccagtattttgctatttaacagaaagctgtttattgcaacta 500
Query: 297 cattgtgtgaaggggtttggaattctaatgttccttgaaaaaagcaggcttcttccatgc 356
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 501 cattgtgtgaaggggtttggaattctaatgttccttgaaaaaagtaggcttcttccatgc 560
Query: 357 acctttgatgtacaaagaaaatgtcaataagtgacctgttggctgtgaccatagac 412
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 561 acctttgatgtacaaagaaaatgtcaataagtgacctgttggctgtgaccacagac 616
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 412
Length of database: 816
Length adjustment: 9
Effective length of query: 403
Effective length of database: 807
Effective search space: 325221
Effective search space used: 325221
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
