Query= MSMg01no102_n19.b1 MSMg01no102_n19.b1 CHROMAT_FILE:
MSMg01no102_n19.b1 PHD_FILE: MSMg01no102_n19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:01:35 2005
(362 letters)
>mm_chr7_149113437_149114198
Length = 762
Score = 673 bits (348), Expect = 0.0
Identities = 357/360 (99%), Gaps = 2/360 (0%)
Strand = Plus / Plus
Query: 4 gaattcaaacccattcc-aggctatattgtgagcccctgtctcaacaaaacaaaacaata 62
||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattcaaaccca-tcctaggctatattgtgagcccctgtctcaacaaaacaaaacaata 262
Query: 63 tgtacaccccctcccacaaaccataaataaatcaaaaagtgaaaactcagcacgtgtcga 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tgtacaccccctcccacaaaccataaataaatcaaaaagtgaaaactcagcacgtgtcga 322
Query: 123 gaaaggaaaggaaaggacggtgttatagacatttagctacttatgccattaaacttccaa 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gaaaggaaaggaaaggacggtgttatagacatttagctacttatgccattaaacttccaa 382
Query: 183 ctattgaaatggataatttgtaggtcagaacatttggggtcagaacaaactcattcacta 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ctattgaaatggataatttgtaggtcagaacatttggggtcagaacaaactcattcacta 442
Query: 243 aactcattcccaaatgtcctgtgatagcatcctatgacccaggccaactagagtagggac 302
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 443 aactcattcccaaatgtcctgtgatagcatcctaggacccaggccaactagagtagggac 502
Query: 303 agggagtagataaacatgggcccctgcccgtgagcctccaactttgtaacaggacctgga 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 agggagtagataaacatgggcccctgcccgtgagcctccaactttgtaacaggacctgga 562
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 362
Length of database: 762
Length adjustment: 9
Effective length of query: 353
Effective length of database: 753
Effective search space: 265809
Effective search space used: 265809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no102_n19.g1 MSMg01no102_n19.g1 CHROMAT_FILE:
MSMg01no102_n19.g1 PHD_FILE: MSMg01no102_n19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:01:35 2005
(240 letters)
>mm_chr7_149219388_149220027
Length = 640
Score = 449 bits (232), Expect = e-131
Identities = 238/240 (99%)
Strand = Plus / Minus
Query: 1 ttgcctttcctccttttccctcttgattgtaccaggcagcactttgtttccagtcttacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ttgcctttcctccttttccctcttgattgtaccaggcagcactttgtttccagtcttacc 381
Query: 61 ttgctgctacttcctcacaatcagtgcctaacctttactttaggagggtgtttggcctgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ttgctgctacttcctcacaatcagtgcctaacctttactttaggagggtgtttggcctgc 321
Query: 121 tgtgtggcccctgtgaatcctctgcttgctgccttggaggaggggttcttgctaacttct 180
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tgtgtggcccctgtgagtcctctgcttgctgccttggaggaggggttcttgctaacttct 261
Query: 181 tgtagctgagttgcgcgagtttacagggcatgagggggttccacttggcttcctcttgta 240
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tgtagctgagttgcgtgagtttacagggcatgagggggttccacttggcttcctcttgta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 640
Length adjustment: 9
Effective length of query: 231
Effective length of database: 631
Effective search space: 145761
Effective search space used: 145761
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
