Query= MSMg01no102_o08.b1 MSMg01no102_o08.b1 CHROMAT_FILE:
MSMg01no102_o08.b1 PHD_FILE: MSMg01no102_o08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:01:37 2005
(244 letters)
>mm_chr7_90288348_90288992
Length = 645
Score = 381 bits (197), Expect = e-110
Identities = 233/245 (95%), Gaps = 1/245 (0%)
Strand = Plus / Plus
Query: 1 atgccgaggaccctgcaaccacggtggaacacatcccacttttaccccatcacattttca 60
||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||
Sbjct: 201 atgccgaggaccctgcaaccagggtggaacacaacccacttttaccagatcacattttca 260
Query: 61 acagctcaggagtcctc-aggggctgcaccaccacattagagtcccacagggaaaggccg 119
||||||||||||||||| |||||||||||||||||||||||| |||||||| ||| | |
Sbjct: 261 acagctcaggagtcctctgggggctgcaccaccacattagagttccacaggggaagacag 320
Query: 120 agagggacaggacagttacagtggcgtctaggaagaaggaaggctcccatatctgttggt 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agagggacaggacagttacagtggcgtctaggaagaaggaaggctcccatatctgttggc 380
Query: 180 tgtacttgagctcctcccctagcccagagcctttcagaagcagaagggtgtattcttcct 239
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 381 tgtacttgagctcctcccctagcccagagcctttcagaagcagaaggctgtattcttcct 440
Query: 240 gcttt 244
|||||
Sbjct: 441 gcttt 445
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 645
Length adjustment: 9
Effective length of query: 235
Effective length of database: 636
Effective search space: 149460
Effective search space used: 149460
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no102_o08.g1 MSMg01no102_o08.g1 CHROMAT_FILE:
MSMg01no102_o08.g1 PHD_FILE: MSMg01no102_o08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:01:38 2005
(241 letters)
>mm_chr7_90428502_90429143
Length = 642
Score = 385 bits (199), Expect = e-111
Identities = 236/263 (89%), Gaps = 24/263 (9%)
Strand = Plus / Minus
Query: 3 tctgctttcaattagtaactctttttc-aaggggctcaggcatacaacagacaacctata 61
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 330 tctgctttcaattagtaactctttttcaaaggggctcaggcatacaacagacaacctata 271
Query: 62 tgcatgcacatgtaagtaagtatccgcatttacatctgtatgcacacgcacacaacacac 121
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 tgcatacacatgtaagtaagtatccgcatttacatctgtatgcacacgcacacaacacac 211
Query: 122 acacacac-----------------------gagagagagagagagagagagagagagag 158
|||||||| |||||||||||||||||||||||||||||
Sbjct: 210 acacacacacacacacacacacagagagagagagagagagagagagagagagagagagag 151
Query: 159 tctatgaagtcttatgaagaatcaccagtttgaccagaatcatagcaaagtgtcacaata 218
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 150 tctatgaagtcttataaagaatcaccagtttgaccagaatcatagcaaagtgtcacagta 91
Query: 219 aactgaaaccattgtccttagta 241
|||||||||||||||||||||||
Sbjct: 90 aactgaaaccattgtccttagta 68
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 8
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 642
Length adjustment: 9
Effective length of query: 232
Effective length of database: 633
Effective search space: 146856
Effective search space used: 146856
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
