XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CATTCACATTACTTTGTGAGCCGAGAAGAAATTAGGTAAGCATTTATTGA
CTATCGACTGTCACCATTGACAGACGTGCACTAACCCGTTTAATTCTATA
AAAATCCTCCAGCAGGAAGAGCTAATATATTCCCCATGCTGCTCATAAAA
TTCCAAAGCAGAGAAGGCAGCCAGCATGTGGCCAAGCTGAGACTAGAACT
TAGGAGATCTGACACCCAAGTATCAGTGTCACTCTCTCCCATGCTGTTTC
CAAACAATGACATTCAGAGATGTTCTCACGCTTCGAGCAAACATACTTCT
CAGATCACTACAACTCGATCTGGCTTACAATGTCAACTAGTAGGATGTTC
TGCTAGTTGCCTGCAGAGCTAAGGGGAACCCCCGAGAAGCTGCATCAGTG
ACTGACTTGTTTATCAAACGCCTACACGCCTACGCCTACGCGGCAGTACA
GCAGAGGCTGACCACTCACAAGGAAGATGCTGTTGTAGCCTTGTGTTTTT
TAACCACTGACTGTCCAGAAGATATCTGCTAGTTTCTGTGAGGTGCACAT
GTCTTCCGCACCTGAAGTTAAACAGCCAATGTGCTATCATTCACCTGATA
AACATCGCTGGGAAGGGAAGGCCAAGTTCTCTCACCTCAAGGTCTCCCAT
TGCTTTTCTTATAGCCCAGTG

CAATACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXAGTATGTTTGGAGGTTTGACGTCACCTC
TGTGCACCCTGTGCCTGGCTTGCCTCTTCAGTGCTCTCTGATCATCTATT
GAATGAACCACATACAGCTAAAGCATGCCCAAACTTACCTAGTAAAAGTT
TGGTTTTATCTTTGCATTCTGGCGTGTTCCACGGTTTGTTGCACTATCCC
CTCGGCAGCCCATACTCTAATGACCCCAATAGTTACAAGAGTGCGTATCA
TATGATGACGTTTTTTTCTATGGTTATGAGGATAGAGACGACGACCCTCG
CATTGTCACAACTTCGCCTCCTTAAGGCTCTGTGCCGGTATCTCCCAACA
ACCTTGCGCACCAATGTTACCCTACGACATGCTTCTCATATTCCCCTGTA
CTTTCGCCAACTTTCACCATCTCGCCAACGACCTTTCTATGCCTCACCCC
TATGACCGTTACATGACAGAGTTTCACGTGACCCCCTTTTTATTCTGCAA
ACAGTATCTTTCATCTTTCTTTCCGCTGTCCTCTATTAAACCGCTTTCCC
CCTGTTTACCTTTTTCCCGCTCTCCCCCATCTTTCCCCCATTTGTTTTGT
TTACATTTTCTCCCACCTTTTCCCTCCCCCCTCTCTCACCCTTTTTCCCT
ACTTCCTATTCTTATCCTCCCACTTTCTCA

Query= MSMg01no103_c11.b1 MSMg01no103_c11.b1 CHROMAT_FILE:
MSMg01no103_c11.b1 PHD_FILE: MSMg01no103_c11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:01:59 2005
         (303 letters)



>mm_chr7_56976250_56976952
          Length = 703

 Score =  545 bits (282), Expect = e-160
 Identities = 297/302 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   gagccgagaagaaattaggtaagcatttattgactatcgactgtcaccattgacagacgt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 gagccgagaagaaattaggtaagcatttattgactatcgactgtcaccactgacagacgt 260

                                                                       
Query: 61  gcactaacccgtttaattctataaaaatcctccagcaggaagagctaatatattccccat 120
           |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcactagcccgtttaattctgtaaaaatcctccagcaggaagagctaatatattccccat 320

                                                                       
Query: 121 gctgctcataaaattccaaagcagagaaggcagccagcatgtggccaagctgagactaga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gctgctcataaaattccaaagcagagaaggcagccagcatgtggccaagctgagactaga 380

                                                                       
Query: 181 acttaggagatctgacacccaagtatcagtgtcactctctcccatgctgtttccaaacaa 240
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 381 acttaggagatctgacacccaagtatcagtgtcacgctctcccatgctgtttccaaacaa 440

                                                                       
Query: 241 tgacattcagagatgttctcacgcttcgagcaaacatacttctcagatcactacaactcg 300
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgacattcagagatgttctcactcttcgagcaaacatacttctcagatcactacaactcg 500

             
Query: 301 at 302
           ||
Sbjct: 501 at 502


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 303
Length of database: 703
Length adjustment: 9
Effective length of query: 294
Effective length of database: 694
Effective search space:   204036
Effective search space used:   204036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no103_c11.g1 MSMg01no103_c11.g1 CHROMAT_FILE:
MSMg01no103_c11.g1 PHD_FILE: MSMg01no103_c11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:01:59 2005
         (121 letters)



>mm_chr7_57172932_57173452
          Length = 521

 Score =  211 bits (109), Expect = 1e-59
 Identities = 118/121 (97%)
 Strand = Plus / Minus

                                                                       
Query: 1   agtatgtttggaggtttgacgtcacctctgtgcaccctgtgcctggcttgcctcttcagt 60
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 321 agtatgtttggaggtttgacgtcacctctgtgcaccctgggcctggcttgcctcttcagt 262

                                                                       
Query: 61  gctctctgatcatctattgaatgaaccacatacagctaaagcatgcccaaacttacctag 120
           ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 261 gctctctgagcatctattgaatgaaccacagacagctaaagcatgcccaaacttacctag 202

            
Query: 121 t 121
           |
Sbjct: 201 t 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 121
Length of database: 521
Length adjustment: 8
Effective length of query: 113
Effective length of database: 513
Effective search space:    57969
Effective search space used:    57969
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)