Query= MSMg01no105_b23.b1 MSMg01no105_b23.b1 CHROMAT_FILE:
MSMg01no105_b23.b1 PHD_FILE: MSMg01no105_b23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:04:38 2005
(341 letters)
>mm_chr7_94778755_94779495
Length = 741
Score = 580 bits (300), Expect = e-170
Identities = 334/354 (94%), Gaps = 16/354 (4%)
Strand = Plus / Minus
Query: 1 aatatagagtctggtctacagagtcacttccaggatagccagggctatacagacacaccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 672 aatatagagtctggtctacagagtcacttccaggatagccagggctatacagaga-accc 614
Query: 61 tgtctcgacaaacc-------------aaaaaaaaaaattaggatttaaataattaaata 107
|||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 613 tgtctcgacaaaccaaaaaaaaaaaaaaaaaaaaaaaa--aggatttaaataattaaata 556
Query: 108 tataaacataaaatgcaagaaactgtacttaaaagtaacatagttttagaaagactttag 167
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 555 tataaacataaaatgcaagaaactgtacttaatagtaacatagttttagaaagactttag 496
Query: 168 atattttaactcatgattacctcaacaaaagccaaccgtgagttttagtgtccaaaacac 227
||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 495 atattttaactcatgattacctcaacaaaagccaatcgtgagttttagtatccaaaacac 436
Query: 228 cttatgtttatttgggctaatgactcttatagcataggtaattgggatattcttcttttt 287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 cttatgtttatttgggctaatgactcttatagcataggtaattgggatattcttcttttt 376
Query: 288 tagtgcaatgaagaaagatgagcagtaactgcagtgatgtcataaattagtaag 341
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 tagtgcaatgaagaaagatgagcagtaactgcagtgatgtcataaattagtaag 322
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 341
Length of database: 741
Length adjustment: 9
Effective length of query: 332
Effective length of database: 732
Effective search space: 243024
Effective search space used: 243024
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no105_b23.g1 MSMg01no105_b23.g1 CHROMAT_FILE:
MSMg01no105_b23.g1 PHD_FILE: MSMg01no105_b23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:04:39 2005
(239 letters)
>mm_chr7_94593591_94594229
Length = 639
Score = 393 bits (203), Expect = e-114
Identities = 230/239 (96%)
Strand = Plus / Plus
Query: 1 tatataaagaagtcctgattaatggttatagggttttctaagtgtgcccactcaaggaaa 60
|||||||||||||||||||| |||||||||||||| ||||||||||| |||||| ||||
Sbjct: 201 tatataaagaagtcctgattcatggttatagggttctctaagtgtgcaaactcaaagaaa 260
Query: 61 gattttgatggcatatttaagctcagagttgaagaatgagtatccaggagaaagaatgaa 120
||||||||||| || ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 261 gattttgatggtatttttaagctcagagttgaagaatgagtatccaggggaaagaatgaa 320
Query: 121 gaggaacaggtatacagcaaatcacacgcacttagtgtgtgacatagttgttcataacgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 321 gaggaacaggtatacagcaaatcacacgcacttagtgtgtgacatagttgttcataaggg 380
Query: 181 tcaaggagggaatatttttggatgatattggagaacaaaaacctgggtttcagccatca 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcaaggagggaatatttttggatgatattggagaacaaaaacctgggtttcagccatca 439
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space: 144900
Effective search space used: 144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
