Query= MSMg01no105_m08.b1 MSMg01no105_m08.b1 CHROMAT_FILE:
MSMg01no105_m08.b1 PHD_FILE: MSMg01no105_m08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:05:31 2005
(363 letters)
>mm_chr7_135137115_135137879
Length = 765
Score = 681 bits (352), Expect = 0.0
Identities = 361/364 (99%), Gaps = 2/364 (0%)
Strand = Plus / Minus
Query: 2 ggaattcaaggggcttagcg-tctagctgtt-aaattctaatattcaatggcatgtgagt 59
|||||||||||||||||| | |||||||||| ||||||||||||||||||||||||||||
Sbjct: 565 ggaattcaaggggcttagtgttctagctgttaaaattctaatattcaatggcatgtgagt 506
Query: 60 ggatcctaagatctggggaaacaaaatttggggcgtctagatttccaagattctaaacct 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ggatcctaagatctggggaaacaaaatttggggcgtctagatttccaagattctaaacct 446
Query: 120 ctatgctccaagaaactcaacagaaacaggttgcttttcagcaacagctggtttgcaagt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ctatgctccaagaaactcaacagaaacaggttgcttttcagcaacagctggtttgcaagt 386
Query: 180 aagctctattgagtctctcagcatctccggacctgccagagtaacaacttagctccaccc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aagctctattgagtctctcagcatctccggacctgccagagtaacaacttagctccaccc 326
Query: 240 tctgtccccaccccacttcctccaccaacccacctccacctagtttcttcagcctagcca 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tctgtccccaccccacttcctccaccaacccacctccacctagtttcttcagcctagcca 266
Query: 300 aaaagccaagtctgaaagtcttaggggcggaaaccaaaactagtttgctggggaaagaac 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aaaagccaagtctgaaagtcttaggggcggaaaccaaaactagtttgctggggaaagaac 206
Query: 360 agga 363
||||
Sbjct: 205 agga 202
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 363
Length of database: 765
Length adjustment: 9
Effective length of query: 354
Effective length of database: 756
Effective search space: 267624
Effective search space used: 267624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no105_m08.g1 MSMg01no105_m08.g1 CHROMAT_FILE:
MSMg01no105_m08.g1 PHD_FILE: MSMg01no105_m08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:05:31 2005
(156 letters)
>mm_chr7_134996031_134996586
Length = 556
Score = 213 bits (110), Expect = 5e-60
Identities = 125/130 (96%)
Strand = Plus / Plus
Query: 1 ttggcgcctcttctccctcaagctcccatgggagctgggactgcagttgccattgtttct 60
|||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||
Sbjct: 201 ttggcgcctcttctccctcaggctcccatgggagctgggactgcagttgtaattgtttct 260
Query: 61 tagcttgagactggctgtacaccaggttggtcttgaactcccaatgctcagagtcagtct 120
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 261 tagcttgagactggctgtacaccaggctggtcttgaactcccaatgctcagagtcagtct 320
Query: 121 cttgagttaa 130
||||| ||||
Sbjct: 321 cttgaattaa 330
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 156
Length of database: 556
Length adjustment: 8
Effective length of query: 148
Effective length of database: 548
Effective search space: 81104
Effective search space used: 81104
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
