Query= MSMg01no106_c02.b1 MSMg01no106_c02.b1 CHROMAT_FILE:
MSMg01no106_c02.b1 PHD_FILE: MSMg01no106_c02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:06:07 2005
(715 letters)
>mm_chr7_61081269_61082379
Length = 1111
Score = 1170 bits (605), Expect = 0.0
Identities = 639/652 (98%), Gaps = 4/652 (0%)
Strand = Plus / Minus
Query: 64 tgctcaaacgtgtaagctaatgcctagtgattttatatgtgttaaatagtaataggaaaa 123
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1111 tgctcaaacgtgtaagctaatacctagtgattttatatgtgttaaatagtaataggaaaa 1052
Query: 124 gcattaatagcaggaatctttcctaaaatgaatttctcctaggccttgccatcaggagca 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1051 gcattaatagcaggaatctttcctaaaatgaatttctcctaggccttgccatcaggagca 992
Query: 184 agtcagtcatgaagtattaattgaagcctgaccatctcaggaaaaccacctcctagttat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 991 agtcagtcatgaagtattaattgaagcctgaccatctcaggaaaaccacctcctagttat 932
Query: 244 tagcctgttggctcctgacatttatattttttaaattccaaacttttaaaaattctaata 303
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 931 tagcctgttggctcctgacatttatattttttaaattccaaactttaaaaaattctaata 872
Query: 304 gttttagtagtcttcattccttattgaggttctttctttccatcatggatgtgtttgtta 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 871 gttttagtagtcttcattccttattgaggttctttctttccatcatggatgtgtttgtta 812
Query: 364 tttaatgtttttcttgactgaatggcatttgaggatgatattagcagaacctttatctct 423
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 811 tttaatgtttttcttgactgaatggcatttgaggatgatattagcagtacctttatctct 752
Query: 424 gtattctagcactcagcaaggtctcctataaagttacctagttgatttcttgaaactcac 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 gtattctagcactcagcaaggtctcctataaagttacctagttgatttcttgaaactcac 692
Query: 484 aggttatgcatgtgtgtgttacttgtccagagaaattcaggagaagtccacaataggtac 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 aggttatgcatgtgtgtgttacttgtccagagaaattcaggagaagtccacaataggtac 632
Query: 544 atattccatgctgtcaaattgacctcagattttgattttccccttgcatcagcattgtct 603
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 atattccatgctttaaaattgacctcagattttgattttccccttgcatcagcattgtct 572
Query: 604 ccatttgtcacttaatgatttacaaatggaagctgactaagttagctatcctttcccact 663
|||||||||||||||||||||||||||||||||||||| || | ||||||||||||||
Sbjct: 571 ccatttgtcacttaatgatttacaaatggaagctgactcag---g-tatcctttcccact 516
Query: 664 gttgtcattaaaagcctttggcaactaactcatgacttanaacatcagatac 715
||||||||||||||||||||||||||||||||| | ||| ||||||||||||
Sbjct: 515 gttgtcattaaaagcctttggcaactaactcattatttagaacatcagatac 464
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 715
Length of database: 1111
Length adjustment: 10
Effective length of query: 705
Effective length of database: 1101
Effective search space: 776205
Effective search space used: 776205
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no106_c02.g1 MSMg01no106_c02.g1 CHROMAT_FILE:
MSMg01no106_c02.g1 PHD_FILE: MSMg01no106_c02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:06:07 2005
(647 letters)
>mm_chr7_60995734_60996780
Length = 1047
Score = 1228 bits (635), Expect = 0.0
Identities = 644/647 (99%)
Strand = Plus / Plus
Query: 1 gtaaagtcgctggagccattctttgtcctatgtgtctgggtctgtctattcctggattca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtaaagtcgctggagccattctttgtcctatgtgtctgggtctgtctattcctggattca 260
Query: 61 tgctcactcagcttctatattcttctgcatcctccttacagcagtatacttcctcaagct 120
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 261 tgctcactcagcttctatattcttctgcatcctccttacagcagcatacttcctcaagct 320
Query: 121 gtccacattaacgatgtcaactacatcaggcctggggatagtcagtgttagccttagaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtccacattaacgatgtcaactacatcaggcctggggatagtcagtgttagccttagaaa 380
Query: 181 ggatgagagttggtcatggatatgcatgtaaaggatacaaaacgtgccaatgaagaaaat 240
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggatgagagttggtcgtggatatgcatgtaaaggatacaaaacgtgccaatgaagaaaat 440
Query: 241 cctgggaaaagaaaaggcaaagtactaagggaattacttgctatgctctaaagccttcac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cctgggaaaagaaaaggcaaagtactaagggaattacttgctatgctctaaagccttcac 500
Query: 301 ccaacttgtcctgtatcatgaggttgtccagaactcaaacccagttttctataaattcta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ccaacttgtcctgtatcatgaggttgtccagaactcaaacccagttttctataaattcta 560
Query: 361 cattgaaacctcaacactcaaataattaagaaggtatatttgttaaactagaagaagaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cattgaaacctcaacactcaaataattaagaaggtatatttgttaaactagaagaagaga 620
Query: 421 aagttattttatttacttttctatagttgtcttatgttatatgaaaaatagagtttatta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aagttattttatttacttttctatagttgtcttatgttatatgaaaaatagagtttatta 680
Query: 481 agacaaacatattactcttcatataatagagtactttatttaaatctactataaagtatg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agacaaacatattactcttcatataatagagtactttatttaaatctactataaagtatg 740
Query: 541 tgtttggaaagagctggacacacaattacggcattagcgtagctgaagaacaaattcctc 600
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 741 tgtttggaaagagctggacacacaattacggcattagtgtagctgaagaacaaattcctc 800
Query: 601 cctttcttctcttaattccatgtcatctatagttcaatgaacgggtg 647
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 cctttcttctcttaattccatgtcatctatagttcaatgaacgggtg 847
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1047
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1037
Effective search space: 660569
Effective search space used: 660569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
