Query= MSMg01no106_d17.b1 MSMg01no106_d17.b1 CHROMAT_FILE:
MSMg01no106_d17.b1 PHD_FILE: MSMg01no106_d17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:06:22 2005
(677 letters)
>mm_chr7_135462237_135463313
Length = 1077
Score = 1079 bits (558), Expect = 0.0
Identities = 615/648 (94%), Gaps = 23/648 (3%)
Strand = Plus / Plus
Query: 14 gaattccatgcatctcaggagatcgctaattttcttcatcacaaatagaaagtggcaggg 73
||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||
Sbjct: 225 gaattccatgcatctcaggagattgctacttttcttcatcacaaatagaaagtggcaggg 284
Query: 74 cgttactgtccagttgctgtccagttgctcgaacacctaaccacacaagactccacagaa 133
|||||||||||||||||| ||||||||||||||||||||| ||| |||||
Sbjct: 285 cgttactgtccagttgct-----------cgaacacctaaccacacaagattccgcagaa 333
Query: 134 ttcacactctgggtttttgagatcttcatgatgccaagaggaagatggcaggttgggtac 193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 ttcacactctgggtttttgagatcttcatgatgccaagaggaagatggcaggttgggtac 393
Query: 194 atcttcctaaaggcttataggcagctgaggcgtgagctgggccctagacaagcctcagga 253
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 394 atcttcctaaaggcttataggctgctgaggcgtgagctgggccctagacaagcctcagga 453
Query: 254 gaaagggcccgtgacactgagcaggcacactgag------------gcaagggcagatcc 301
|||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 454 gaaagggcccgtgacactgagcaggcacactgagcatgttttggaggcaagggcagatcc 513
Query: 302 aggttttgtgagacctaaagcttaaggaatgtgggaaattccctctttcagaccatgaag 361
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 514 aggttttgtgagacctaaagcttaaggaatgtgggaaattccctcttccagaccatgaag 573
Query: 362 agcagctgggcgtggtggcacacactcagcgatgtggcggctcaagcagtaggagcctca 421
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 agcagctgggcgtggtggcgcacactcagcgatgtggcggctcaagcagtaggagcctca 633
Query: 422 ttagtttgaagtcagcctgagctatttatagcaaggtcctgcctcatggagctagagaga 481
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 ttagtttgaagtcagtctgagctatttatagcaaggtcctgcctcatggagctagagaga 693
Query: 482 tggctcagctgtgatgggcacttgctgctcttacagaggacccaagttcgattcccagta 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 tggctcagctgtgatgggcacttgctgctcttacagaggacccaagttcgattcccagta 753
Query: 542 ccaacacagtggctcacaactatcctaactccagttgcaggggatccaatgccctcttct 601
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 754 ccaacacagtggctcacaactatcctaactccagttgcagggaatccaatgccctcttct 813
Query: 602 gacctccaagggtacaaggcatacatgtgatgtgatgtatatgtgtgt 649
|||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 814 gacctccaagggtacaaggcatacatgtgatgtgatgtatgtgtgtgt 861
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 677
Length of database: 1077
Length adjustment: 10
Effective length of query: 667
Effective length of database: 1067
Effective search space: 711689
Effective search space used: 711689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no106_d17.g1 MSMg01no106_d17.g1 CHROMAT_FILE:
MSMg01no106_d17.g1 PHD_FILE: MSMg01no106_d17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:06:22 2005
(489 letters)
>mm_chr7_135489137_135490026
Length = 890
Score = 841 bits (435), Expect = 0.0
Identities = 453/459 (98%), Gaps = 1/459 (0%)
Strand = Plus / Minus
Query: 7 gtcaccaggcttggtgaagacgtgttttaccagctgacccatctcttcagctctgagcta 66
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 459 gtcaccaggcttggtgaagacgtgttttaccagctgagccatctcttcagctctgagcta 400
Query: 67 atattttccagatgtaaagaactgggctatgttgtctcatcccaagaaacaagagatcca 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 atattttccagatgtaaagaactgggctatgttgtctcatcccaagaaacaagagatcca 340
Query: 127 tggcagtgcagttgctaagcttactactactgcag-cccggagcccgcagtgctggaaga 185
||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 339 tggcagtgcagttgctaagcttactactactgcagccccggagctcgcagtgctggaaga 280
Query: 186 tgggtagcatcggtgaggatgacacaggtgagaggcaggttgaagatgggttgggctgct 245
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 tgggtagcaccggtgaggatgacacaggtgagaggcaggttgaagatgggttgggctgct 220
Query: 246 ttctcatcagcccttgccaggtggcaatgacagctcgtcaagacttccgctttccacaaa 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 ttctcatcagcccttgccaggtggcaatgacagctcgtcaagacttccgctttccacaaa 160
Query: 306 agcagaaaaccagggtgttaatgtgaaatttcttcatttaaaagtttgactattaattca 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 agcagaaaaccagggtgttaatgtgaaatttcttcatttaaaagtttgactattaattca 100
Query: 366 acatttgtctacttcttagatacagatggaacaaaacacccgcctacagtgttaccagtt 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99 acatttgtctacttcttagatacagatggaacaaaacacccgcctacagtgttaccagtt 40
Query: 426 tgcgagcgtgctaccaggtgcgcgtcagcccgattggag 464
||| |||||||||||||||||| ||||||||||||||||
Sbjct: 39 tgctagcgtgctaccaggtgcgtgtcagcccgattggag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 489
Length of database: 890
Length adjustment: 10
Effective length of query: 479
Effective length of database: 880
Effective search space: 421520
Effective search space used: 421520
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
