Query= MSMg01no106_k24.b1 MSMg01no106_k24.b1 CHROMAT_FILE:
MSMg01no106_k24.b1 PHD_FILE: MSMg01no106_k24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:07:29 2005
(389 letters)
>mm_chr7_134087631_134088419
Length = 789
Score = 721 bits (373), Expect = 0.0
Identities = 385/389 (98%)
Strand = Plus / Plus
Query: 1 ttcattgtatccttttcaacactgcccagcagactgccccttttcctgtgtcttcctctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcattgtatccttttcaacactgcccagcagactgccccttttcctgtgtcttcctctg 260
Query: 61 tttgtctttgttctgtcctggcacttgagatgcgttcctgtcctgctgccacccctcagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttgtctttgttctgtcctggcacttgagatgcgttcctgtcctgctgccacccctcagt 320
Query: 121 gtgctttccctagctgtccacctccctctcttgagttggtcaaacaccacattcccagca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtgctttccctagctgtccacctccctctcttgagttggtcaaacaccacattcccagca 380
Query: 181 aggccttgtctgaattccctactgaaagatgaaactctcttgggaaaggctattcacatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aggccttgtctgaattccctactgaaagatgaaactctcttgggaaaggctattcacatc 440
Query: 241 ccctttccaactttcttcataagatgtcatcatctgacttattatttatcttaggaagaa 300
||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 441 ccctttccagctttcttcataagatgtcatcatctgacttaatatatatcttaggaagaa 500
Query: 301 tgagtctgtgttctccccctagacttccaacatgctgagggcaagcatttgtttataata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgagtctgtgttctccccctagacttccaacatgctgagggcaagcatttgtttataata 560
Query: 361 ctatgttcctgatgcttggaacaacccag 389
||| |||||||||||||||||||||||||
Sbjct: 561 ctacgttcctgatgcttggaacaacccag 589
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 389
Length of database: 789
Length adjustment: 9
Effective length of query: 380
Effective length of database: 780
Effective search space: 296400
Effective search space used: 296400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no106_k24.g1 MSMg01no106_k24.g1 CHROMAT_FILE:
MSMg01no106_k24.g1 PHD_FILE: MSMg01no106_k24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:07:29 2005
(404 letters)
>mm_chr7_134183774_134184579
Length = 806
Score = 673 bits (348), Expect = 0.0
Identities = 392/408 (96%), Gaps = 6/408 (1%)
Strand = Plus / Minus
Query: 1 cagataggattcagaccgagagactgattgcc-ccttggatctccatgcaggcaggcaaa 59
|||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 606 cagataggattcagaccgagagactgattgcctcc-tggatctccatgcaggcaggcaaa 548
Query: 60 acacgtacataaaaagatagtgaaaatggtagttaaagtgggttcagaggttgggtggac 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 acacgtacataaaaagatagtgaaaatggtagttaaagtgggttcagaggttgggtggac 488
Query: 120 ttttactcaaccttgaaaatatcaaaaagagcaagcgttgcttagcaataaacgaggcca 179
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 487 ttttactcaaccttgaaaatatcaaaaagagcaagcgttgcttagcaataaaagaggcca 428
Query: 180 ggaagattgtgctgattggttttctcttcctagtagagaggagcaggcggggagcaccgc 239
||||||||||| ||| ||||| ||||||||||||||||||||||| || |||||||||||
Sbjct: 427 ggaagattgtggtgaatggttgtctcttcctagtagagaggagcaagctgggagcaccgc 368
Query: 240 tcagctggtaaagtccttgtcccggaagcctgaggactgagtttcatcccatgttgagga 299
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 tcagc-ggtaaagtccttgtcccggaagcctgaggactgagtttcatcccatgttgagga 309
Query: 300 acactagggtttgatctttggcctccatgtccatgtgcattcgcacataggtgcgggtgt 359
||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 308 acactagggtttgatctttggcctccatgcccatgtgcattcgcacataggtgtgggtgt 249
Query: 360 gcacaaacagaacaa---ttaaaacctaccaccggtgtgatcctcaca 404
|||||||||||| || |||||||||||||| |||||||||||||||
Sbjct: 248 gcacaaacagaagaagaattaaaacctaccactggtgtgatcctcaca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 404
Length of database: 806
Length adjustment: 9
Effective length of query: 395
Effective length of database: 797
Effective search space: 314815
Effective search space used: 314815
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
