Query= MSMg01no107_d17.b1 MSMg01no107_d17.b1 CHROMAT_FILE:
MSMg01no107_d17.b1 PHD_FILE: MSMg01no107_d17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:08:49 2005
(509 letters)
>mm_chr7_95538021_95538929
Length = 909
Score = 930 bits (481), Expect = 0.0
Identities = 506/523 (96%), Gaps = 14/523 (2%)
Strand = Plus / Plus
Query: 1 aaaatcatgttcaaagattttggaggagctctctagatatataaaaaataacctttgtag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaaatcatgttcaaagattttggaggagctctctagatatataaaaaataacctttgtag 260
Query: 61 ctcaagaagactatttttgtaagtgtattttattttggaaataaaacagatgttttatta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctcaagaagactatttttgtaagtgtattttattttggaaataaaacagatgttttatta 320
Query: 121 tcttcaaggaaggaaatgattttgcttaaaatgttatttcctatggtatatcacttcata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcttcaaggaaggaaatgattttgcttaaaatgttatttcctatggtatatcacttcata 380
Query: 181 tatagtgtttaaagcaagaaaaaagtcttattaagactccaacaatgttatatttggcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tatagtgtttaaagcaagaaaaaagtcttattaagactccaacaatgttatatttggcaa 440
Query: 241 tgccacactggattaaaagttataatgtgctaagctttctccttatttgtttttaagaaa 300
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 441 tgccacactggattaaaagttataatgtgctaagctttctccttaaatgtttttaagaaa 500
Query: 301 atagattatgataaaaattttttcagaatatttgaaagtaaggaaataatcattatgtaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atagattatgataaaaattttttcagaatatttgaaagtaaggaaataatcattatgtaa 560
Query: 361 acaagtagaataaaatgtttatgtacctaccattattctaagcatatctacatgtctaca 420
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 561 acaagtagaataaaatgtttatgtacctaccattgttctaagcatatctacatgtctaca 620
Query: 421 tatatctatctatctatctatctatctatctatctatctatctatctatctatctatcta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tatatctatctatctatctatctatctatctatctatctatctatctatctatctatcta 680
Query: 481 t--------------gcattaacaggcagaaataaacattaaa 509
| ||||||||||||||||||||||||||||
Sbjct: 681 tctatctatctatatgcattaacaggcagaaataaacattaaa 723
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 62
Number of extensions: 19
Number of successful extensions: 19
Number of sequences better than 10.0: 1
Number of HSP's gapped: 14
Number of HSP's successfully gapped: 1
Length of query: 509
Length of database: 909
Length adjustment: 10
Effective length of query: 499
Effective length of database: 899
Effective search space: 448601
Effective search space used: 448601
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no107_d17.g1 MSMg01no107_d17.g1 CHROMAT_FILE:
MSMg01no107_d17.g1 PHD_FILE: MSMg01no107_d17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:08:49 2005
(486 letters)
>mm_chr7_95692873_95693758
Length = 886
Score = 886 bits (458), Expect = 0.0
Identities = 479/486 (98%)
Strand = Plus / Minus
Query: 1 ttcttttgttgccttcctagcttttgttgtttaactggacgtcagtgaaaaatacataaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 ttcttttgttgccttcctagcttttgttgtttaactggacgtcagtgaaaaatacataaa 627
Query: 61 cacagagatgttcaaaggtcattctttctgactatgcactcttaatgtctacattagcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 cacagagatgttcaaaggtcattctttctgactatgcactcttaatgtctacattagcta 567
Query: 121 aaactaagttgtatcatgtgtaatgttgaaattatgcaaccttctttcaatagaattgca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 aaactaagttgtatcatgtgtaatgttgaaattatgcaaccttctttcaatagaattgca 507
Query: 181 gtaatatcttgcattcaattttaaaaagtgagagatttgcctaaagaagtaatgcggttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 506 gtaatatcttgcattcaattttaaaaagtgagagatttgcctaaagaagtaatgcgggtg 447
Query: 241 ggtggcaggatacagtggaatcagttgatgatctggtgtatagtgactttactaacattg 300
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 446 ggtggcaggatacagtggaatcagttgatgatctggtgtaaagtgactttactaacattg 387
Query: 301 caaggagatgcgttattattaatgcttatatgataacacacgatgcacaataattgtttg 360
||||||||||||||||||||||||||||||||| |||||| |||| | ||||||||||||
Sbjct: 386 caaggagatgcgttattattaatgcttatatgagaacacaggatggagaataattgtttg 327
Query: 361 ggcctggctagagattcatctttctttctaatgagtattgttgagttcatagacatgtct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 ggcctggctagagattcatctttctttctaatgagtattgttgagttcatagacatgtct 267
Query: 421 actcgactactgataagccacaagggggcgcacatacctttatggatagcttctatgtgc 480
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 actcgactactgaaaagccacaagggggcgcacatacctttatggatagcttctatgtgc 207
Query: 481 actgta 486
||||||
Sbjct: 206 actgta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 486
Length of database: 886
Length adjustment: 10
Effective length of query: 476
Effective length of database: 876
Effective search space: 416976
Effective search space used: 416976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
