Query= MSMg01no108_e02.b1 MSMg01no108_e02.b1 CHROMAT_FILE:
MSMg01no108_e02.b1 PHD_FILE: MSMg01no108_e02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:11:03 2005
(655 letters)
>mm_chr7_120706039_120707093
Length = 1055
Score = 1222 bits (632), Expect = 0.0
Identities = 647/652 (99%), Gaps = 2/652 (0%)
Strand = Plus / Minus
Query: 4 ggaattcacaagcaatc-tcaactatgctaagatgcaaaggcacattgggtgtcaatgaa 62
||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 854 ggaattcacaagcaa-catgaactatgctaagatgcaaaggcacattgggtgtcaatgaa 796
Query: 63 aaattaactgaaatgatctaaattattttaaagttttgatatgttcaaagtatttttgag 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 aaattaactgaaatgatctaaattattttaaagttttgatatgttcaaagtatttttgag 736
Query: 123 agatcaggttaaatcaaatactttaaaaaaattaatgcactggatggaaaacagaaagtc 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 agatcaggttaaatcaaatactttaaaaaaattaatgcactggatggaaaacagaaagtc 676
Query: 183 tctttggaaaactaaccctgacctagtattctggtctatataactgcattcacctcaaca 242
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 675 tctttggaaaactaaccctgacccagtattctggtctatataactgcattcacctcaaca 616
Query: 243 aaggtgaaatactcagcacatgttttagaggctctgctttatgaaggcctccttgatagc 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 aaggtgaaatactcagcacatgttttagaggctctgctttatgaaggcctccttgatagc 556
Query: 303 aaattcttataaaaagcttcaactttaatctacatcccccaaaattcaatagaatcctca 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 aaattcttataaaaagcttcaactttaatctacatcccccaaaattcaatagaatcctca 496
Query: 363 aagaatatgaattaaagaaaaatgaataatgattaacaaaacgacaacttggaaacaagg 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 aagaatatgaattaaagaaaaatgaataatgattaacaaaacgacaacttggaaacaagg 436
Query: 423 taccctggttttagactgggctcaaacagcagaatcggacactgcctatcatttaaatgt 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 taccctggttttagactgggctcaaacagcagaatcggacactgcctatcatttaaatgt 376
Query: 483 gaactatgagagaaaggatttacagcaattatgaagagatatccaagattaagttgaact 542
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 375 gaactatgagagaaaggatttacagcaattatgaggagatatccaagattaagttgaact 316
Query: 543 ttctaaaaatgaaaacatataaactcaatggaatggtttcaacccagctgactttctgtt 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 ttctaaaaatgaaaacatataaactcaatggaatggtttcaacccagctgactttctgtt 256
Query: 603 gaaaaatttaaattatttacactttagtccaaaagcaaagtatttatttgca 654
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 gaaaaatttaaattatttacactttagtccaaaagcaaagtatttatttgca 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 655
Length of database: 1055
Length adjustment: 10
Effective length of query: 645
Effective length of database: 1045
Effective search space: 674025
Effective search space used: 674025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no108_e02.g1 MSMg01no108_e02.g1 CHROMAT_FILE:
MSMg01no108_e02.g1 PHD_FILE: MSMg01no108_e02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:11:03 2005
(402 letters)
>mm_chr7_120576383_120577184
Length = 802
Score = 770 bits (398), Expect = 0.0
Identities = 401/402 (99%)
Strand = Plus / Plus
Query: 1 agaaggaagtgacctacgatcagttcaaccgagtgacctatgatccagaaccaaggtgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agaaggaagtgacctacgatcagttcaaccgagtgacctatgatccagaaccaaggtgga 260
Query: 61 taaaacagtaacttcacaacctggggattaagtagattaaagaataaacctgactgaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taaaacagtaacttcacaacctggggattaagtagattaaagaataaacctgactgaaaa 320
Query: 121 taaaaagaggatatgcccatggcagaaaaataaaaatgaagcaatccttcctgtgtaagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taaaaagaggatatgcccatggcagaaaaataaaaatgaagcaatccttcctgtgtaagt 380
Query: 181 caatccaggtaatacaaagaatcacatgtcgagggtggaagtagagatctggcagagagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caatccaggtaatacaaagaatcacatgtcgagggtggaagtagagatctggcagagagc 440
Query: 241 acagaagaaaactttcattatcccaaagtagaagaacatttcttaaaaccagcactggtc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acagaagaaaactttcattatcccaaagtagaagaacatttcttaaaaccagcactggtc 500
Query: 301 atacaaaggagacttcacaatgcagaacttcagcaaaggcaaatacaaagtgaaaaaggg 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 501 atacaaaggagacttcacaatgcagaacttcagcaaaggcaaatacaaagtgaaaagggg 560
Query: 361 ccatatcttcaaaatatctcatatataccaactgctatgtag 402
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ccatatcttcaaaatatctcatatataccaactgctatgtag 602
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 402
Length of database: 802
Length adjustment: 9
Effective length of query: 393
Effective length of database: 793
Effective search space: 311649
Effective search space used: 311649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
