Query= MSMg01no112_n16.b1 MSMg01no112_n16.b1 CHROMAT_FILE:
MSMg01no112_n16.b1 PHD_FILE: MSMg01no112_n16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:18:08 2005
(426 letters)
>mm_chr7_139668745_139669570
Length = 826
Score = 745 bits (385), Expect = 0.0
Identities = 412/421 (97%)
Strand = Plus / Plus
Query: 5 gaattcattagctattccatacacctctaatttctcatgacacaaatactcccttttctc 64
|||||||||||||| ||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 205 gaattcattagctaatccatacacctctaatttcgcatgacacaaatactcccttctctc 264
Query: 65 aggagactgagttccttgaaggcaggatggagacccagacccaagcaaagatagccagtg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aggagactgagttccttgaaggcaggatggagacccagacccaagcaaagatagccagtg 324
Query: 125 catgagtcaatgggtccatgaacgacctgtgcaatccctcctggctatctctccagtctc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 catgagtcaatgggtccatgaacgacctgtgcaatccctcctggctatctctccagtctc 384
Query: 185 tgggtatgcaacgggtttctagatgaagagaaaaaaagctcacacatcacgtctgctgga 244
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 taggtatgcaacgggtttctagatgaagagaaaaaaagctcacacatcacgtctgctgga 444
Query: 245 aggagagtggcagcacaatttaatcacataactcgttaatcaactcgcccaagttgttag 304
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aggagagtggcagtacaatttaatcacataactcgttaatcaactcgcccaagttgttag 504
Query: 305 gcattttggaggcatttctatgtacagtgacccagaggtccctagctacatatatactgg 364
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gcattttggaggcatttccatgtacagtgacccagaggtccctagctacatatatactgg 564
Query: 365 gaattcgggccctgctcactgccactctaatacccagactcagttttcctaaggagccct 424
||||||||| |||||| ||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 565 gaattcgggtcctgcttactgccactctaatacccagactcagtttccctaaggagccct 624
Query: 425 g 425
|
Sbjct: 625 g 625
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 426
Length of database: 826
Length adjustment: 9
Effective length of query: 417
Effective length of database: 817
Effective search space: 340689
Effective search space used: 340689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no112_n16.g1 MSMg01no112_n16.g1 CHROMAT_FILE:
MSMg01no112_n16.g1 PHD_FILE: MSMg01no112_n16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:18:08 2005
(230 letters)
>mm_chr7_139835106_139835739
Length = 634
Score = 362 bits (187), Expect = e-104
Identities = 217/227 (95%), Gaps = 4/227 (1%)
Strand = Plus / Minus
Query: 6 ctaaatggttttaggagactgtttctgtggtggtgggactcaaacctagggcttcattct 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 ctaaatggttttaggagactgtttctgtggtggtgggactcaaacctagggcttcattct 373
Query: 66 tgctatcttca-accctatga-gtagtgatggtggttgtcgtctgaattcctgtccctgt 123
||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 372 tgctatcttcagaccctatgaggtagtgatggtggttgtcgtctgaattcctgtccctgt 313
Query: 124 tgtctgggctacagccaggagcacaattgctaaggtggacagta-actcattt-acactg 181
| |||||||||||||||||||||| |||||||||| ||||||| |||||||| ||||||
Sbjct: 312 tatctgggctacagccaggagcacgattgctaaggcagacagtagactcatttaacactg 253
Query: 182 aagacccaccacaggctccctcccagcagcgcggctaactcacggtc 228
||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 252 aagacccaccaaaggctccctcccagcagtgcggctaactcacggtc 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 230
Length of database: 634
Length adjustment: 9
Effective length of query: 221
Effective length of database: 625
Effective search space: 138125
Effective search space used: 138125
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
