Query= MSMg01no114_k04.b1 MSMg01no114_k04.b1 CHROMAT_FILE:
MSMg01no114_k04.b1 PHD_FILE: MSMg01no114_k04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:20:21 2005
(556 letters)
>mm_chr7_61109595_61110550
Length = 956
Score = 932 bits (482), Expect = 0.0
Identities = 530/546 (97%), Gaps = 3/546 (0%)
Strand = Plus / Minus
Query: 13 tcaaga-tacttgtttgcttc-tatatttatggttaaatgttttatcttttaaaaatatt 70
|||||| || ||||||||||| |||| ||| |||||||||||||||||||||||||||||
Sbjct: 954 tcaagagtatttgtttgcttcatata-ttacggttaaatgttttatcttttaaaaatatt 896
Query: 71 tttttttattttatatgtatgaattttgtccaccataggcatacattgaacaggcaggca 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 895 tttttttattttatatgtatgaattttgtccaccataggcatacattgaacaggcaggca 836
Query: 131 tgtgggagctgggaatcaaacctaggtccccaggaagagcatccagtgtacttaacatct 190
||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 835 tgtgggaactgggaatcatacctaggtccccaggaagagcatccagtgtacttaacatct 776
Query: 191 aagctatcattctagccccaatgtcttgtttatatttgcctatatgtacccttcaagaat 250
|||| |||| |||||||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 775 aagccatcaatctagccccaatgtcttgtttatatttgtctaaatgtacccttcaagaat 716
Query: 251 aagaagtgttttatttctgggtaggtctcaaattgatgaaaatttatataactaatatgt 310
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 715 aagaagtgttttatttctgggtaggtctcaaattgatgaaaatttatataactactatgt 656
Query: 311 ttcagagttatgactacatgagaaataaggtgaagactgagttcctatgctattctttgg 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 ttcagagttatgactacatgagaaataaggtgaagactgagttcctatgctattctttgg 596
Query: 371 tgtgcactgtaagtcacacccttaccattcattcagtgtgtcctagtaaccacagaccag 430
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 tgtgcactgtaagtcacgcccttaccattcattcagtgtgtcctagtaaccacagaccag 536
Query: 431 gcttgaggtatgtgaaagaagagctgagtatgactacaacatggtgggttagaaatctta 490
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 535 gcttgaggtatgtgaaagaagagctgagtatgactacaacatggtgggttagaaaactta 476
Query: 491 actaaagtcaccattaactgagactgtggctttagaagaatccatggggctgctgcatgt 550
||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 475 actaaagtcaccattaactgagaatgtggctttagaagaatccacggggctgctgcatgt 416
Query: 551 gacaca 556
||||||
Sbjct: 415 gacaca 410
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 556
Length of database: 956
Length adjustment: 10
Effective length of query: 546
Effective length of database: 946
Effective search space: 516516
Effective search space used: 516516
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no114_k04.g1 MSMg01no114_k04.g1 CHROMAT_FILE:
MSMg01no114_k04.g1 PHD_FILE: MSMg01no114_k04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:20:22 2005
(648 letters)
>mm_chr7_60995687_60996734
Length = 1048
Score = 1237 bits (640), Expect = 0.0
Identities = 646/648 (99%)
Strand = Plus / Plus
Query: 1 tgtactgcctttcatattttagaagaaccgtttacctatccatcagtgtaaagtcgctgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtactgcctttcatattttagaagaaccgtttacctatccatcagtgtaaagtcgctgg 260
Query: 61 agccattctttgtcctatgtgtctgggtctgtctattcctggattcatgctcactcagct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agccattctttgtcctatgtgtctgggtctgtctattcctggattcatgctcactcagct 320
Query: 121 tctatattcttctgcatcctccttacagcagtatacttcctcaagctgtccacattaacg 180
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 321 tctatattcttctgcatcctccttacagcagcatacttcctcaagctgtccacattaacg 380
Query: 181 atgtcaactacatcaggcctggggatagtcagtgttagccttagaaaggatgagagttgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgtcaactacatcaggcctggggatagtcagtgttagccttagaaaggatgagagttgg 440
Query: 241 tcatggatatgcatgtaaaggatacaaaacgtgccaatgaagaaaatcctgggaaaagaa 300
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcgtggatatgcatgtaaaggatacaaaacgtgccaatgaagaaaatcctgggaaaagaa 500
Query: 301 aaggcaaagtactaagggaattacttgctatgctctaaagccttcacccaacttgtcctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaggcaaagtactaagggaattacttgctatgctctaaagccttcacccaacttgtcctg 560
Query: 361 tatcatgaggttgtccagaactcaaacccagttttctataaattctacattgaaacctca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tatcatgaggttgtccagaactcaaacccagttttctataaattctacattgaaacctca 620
Query: 421 acactcaaataattaagaaggtatatttgttaaactagaagaagagaaagttattttatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 acactcaaataattaagaaggtatatttgttaaactagaagaagagaaagttattttatt 680
Query: 481 tacttttctatagttgtcttatgttatatgaaaaatagagtttattaagacaaacatatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tacttttctatagttgtcttatgttatatgaaaaatagagtttattaagacaaacatatt 740
Query: 541 actcttcatataatagagtactttatttaaatctactataaagtatgtgtttggaaagag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 actcttcatataatagagtactttatttaaatctactataaagtatgtgtttggaaagag 800
Query: 601 ctggacacacaattacggcattagtgtagctgaagaacaaattcctcc 648
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ctggacacacaattacggcattagtgtagctgaagaacaaattcctcc 848
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1048
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1038
Effective search space: 662244
Effective search space used: 662244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
