Query= MSMg01no116_f20.b1 MSMg01no116_f20.b1 CHROMAT_FILE:
MSMg01no116_f20.b1 PHD_FILE: MSMg01no116_f20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:22:36 2005
(443 letters)
>mm_chr7_111485586_111486428
Length = 843
Score = 756 bits (391), Expect = 0.0
Identities = 422/433 (97%), Gaps = 5/433 (1%)
Strand = Plus / Minus
Query: 5 gaattcttcagcttc--cactattagtacttgatttctcc-ataacttgactttccactt 61
|||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 650 gaattcttcagc-acgacactattagtacttgatttctccaataacttgactttccactt 592
Query: 62 attacacccaaacagaatttggataatagcaatacaaatgaacagattaaatttttagct 121
|||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 591 attacacccaaacagaatttggctaatagcgatacaaatgaacagattaaatttttagct 532
Query: 122 gcaaatgaattttaatagtttagaacaacagtgaagaccagccttttttttttttaaatc 181
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 531 gcaaatgaattttaatagtttagaacaacagtgaagaccagcc-tttttttttttaaatc 473
Query: 182 agacatgctccacatgagattatacttatggaatcaaactggcaaggaagacaaactagc 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 agacatgctccacatgagattatacttatggaatcaaactggcaaggaagacaaactagc 413
Query: 242 atttgaagacaacaggtatttatagtactccaaacattccacaaaatatttcattgaata 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 atttgaagacaacaggtatttatagtactccaaacattccacaaaatatttcattgaata 353
Query: 302 caaaggaccatagggccatgtattattatgcacaagacagttaaatgggtatattatatt 361
|||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||
Sbjct: 352 caaaggaccatagggccatgtattattatgtacaagacagttaaatgggtattttatatt 293
Query: 362 tacccatacctagtttcatacaaccatcttaagtcaaatgcacttcaattttcagtttaa 421
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 tacacatacctagtttcatacaaccatcttaagtcaaatgcacttcaattttcagtttaa 233
Query: 422 gaaccttagaatt 434
|||||||||||||
Sbjct: 232 gaaccttagaatt 220
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 443
Length of database: 843
Length adjustment: 10
Effective length of query: 433
Effective length of database: 833
Effective search space: 360689
Effective search space used: 360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no116_f20.g1 MSMg01no116_f20.g1 CHROMAT_FILE:
MSMg01no116_f20.g1 PHD_FILE: MSMg01no116_f20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:22:36 2005
(234 letters)
>mm_chr7_111336323_111336956
Length = 634
Score = 447 bits (231), Expect = e-130
Identities = 231/231 (100%)
Strand = Plus / Plus
Query: 1 ttttagcaggatcaaggagtggcaccctgacaggcagttggccctgttctttctttgtct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttttagcaggatcaaggagtggcaccctgacaggcagttggccctgttctttctttgtct 260
Query: 61 tggaggagttcaaatgaagtaaaatgtcttaaaataaaatctccaataaattcaattaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggaggagttcaaatgaagtaaaatgtcttaaaataaaatctccaataaattcaattaca 320
Query: 121 tgtattgtattgagcaatttgtttaatttgagaccttgttactatttttgatggctaggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtattgtattgagcaatttgtttaatttgagaccttgttactatttttgatggctaggc 380
Query: 181 acataaaatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 231
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acataaaatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 431
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 48
Number of extensions: 17
Number of successful extensions: 17
Number of sequences better than 10.0: 1
Number of HSP's gapped: 15
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 634
Length adjustment: 9
Effective length of query: 225
Effective length of database: 625
Effective search space: 140625
Effective search space used: 140625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
