Query= MSMg01no116_l17.b1 MSMg01no116_l17.b1 CHROMAT_FILE:
MSMg01no116_l17.b1 PHD_FILE: MSMg01no116_l17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:23:04 2005
(613 letters)
>mm_chr7_68020451_68021463
Length = 1013
Score = 1141 bits (590), Expect = 0.0
Identities = 608/614 (99%), Gaps = 2/614 (0%)
Strand = Plus / Plus
Query: 1 aatttattattagtctaacca-aattttctcatttatggataaatcataactatataaac 59
|||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatttattattagtctaa-cagaattttctcatttatggataaatcataactatataaac 259
Query: 60 cagagtaaaagtatgctaatggaagtatgctaagttggaaaaatagagtgaagaacggga 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 cagagtaaaagtatgctaatggaagtatgctaagttggaaaaatagagtgaagaacggga 319
Query: 120 atgtagtgaaactagttagtacacatcaccacttatcatgggaaaggtattttagagaag 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 atgtagtgaaactagttagtacacatcaccacttatcatgggaaaggtattttagagaag 379
Query: 180 aattactgaggaactcacagtagagcaatcttctcatagggcctcagcatttcacttctg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 aattactgaggaactcacagtagagcaatcttctcatagggcctcagcatttcacttctg 439
Query: 240 attctcctgtatctccaggattgaggggttgtagttacacatgatagtcatctctgttgc 299
||||||||| | ||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 440 attctcctgaacctccaggattgagtggttgtagttacacatgatagtcatctctgttgc 499
Query: 300 ttggagagaatacactgaaaattattcgttgatttaattctagtaaccttaagtaatttc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ttggagagaatacactgaaaattattcgttgatttaattctagtaaccttaagtaatttc 559
Query: 360 aaatgtcatcttgtctgtggaaaaacaaccattcagaaaaaccacgtggggtaatagttc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 aaatgtcatcttgtctgtggaaaaacaaccattcagaaaaaccacgtggggtaatagttc 619
Query: 420 cttttgaacattttctccatttcataatatttatgcaagtggttaaacaatagggcacta 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 cttttgaacattttctccatttcataatatttatgcaagtggttaaacaatagggcacta 679
Query: 480 atttatctcatgcacctatacattatttattgttatatacccatcatgtttatgaaacag 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 atttatctcatgcacctatacattatttattgttatatacccatcatgtttatgaaacag 739
Query: 540 cacctggaaaatgaaacaaaactttaaatgtccagtgcatgatgggatagaaaacaaagc 599
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 cacctggaaaatgaaataaaactttaaatgtccagtgcatgatgggatagaaaacaaagc 799
Query: 600 tatcatcccagaaa 613
||||||||||||||
Sbjct: 800 tatcatcccagaaa 813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 613
Length of database: 1013
Length adjustment: 10
Effective length of query: 603
Effective length of database: 1003
Effective search space: 604809
Effective search space used: 604809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no116_l17.g1 MSMg01no116_l17.g1 CHROMAT_FILE:
MSMg01no116_l17.g1 PHD_FILE: MSMg01no116_l17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:23:04 2005
(502 letters)
>mm_chr7_68085631_68086533
Length = 903
Score = 911 bits (471), Expect = 0.0
Identities = 495/503 (98%), Gaps = 1/503 (0%)
Strand = Plus / Minus
Query: 1 ctttagtcctttctctaacttgttctttgggggacctactggggacccc-cataattctt 59
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 703 ctttagtcctttctctaacttgttctttgggggacctactggggaccccaaataattctt 644
Query: 60 actattatcttgtgttattcatttagtaataatttaataattgcattctttaattattat 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 actattatcttgtgttattcatttagtaataatttaataattgcattctttaattattat 584
Query: 120 ttgggagcatatgctacttcaaacgaaaataaattttcagccattaacaataacaaacca 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 ttgggagcatatgctacttcaaacgaaaataaattttcagccattaacaataacaaacca 524
Query: 180 tgtggaaagcaaaataaaaaccatggtatacatttgaaactgttaatacaaattactgct 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 tgtggaaagcaaaataaaaaccatggtatacatttgaaactgttaatacaaattactgct 464
Query: 240 cctcaaaggaatgaaaattagggatcattggaaactatattcagtacaggattgtacttt 299
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 463 cctcaaaggaatgaaaattagggatcattggaaactatattcagtacaggagtgtacttt 404
Query: 300 gcacgaaggctggttcagttgtgatattgagggtataagagtctcaggtgatcattgtct 359
| | |||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 403 gtaggaaggctggttcagttgtgatattgagggtataagagtctcaggtgatcaatgtct 344
Query: 360 tcagctacatatgtgattcccagggggaaacagctgaaccccagtcataactcttaactt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 tcagctacatatgtgattcccagggggaaacagctgaaccccagtcataactcttaactt 284
Query: 420 ttcagtcaaatatgtgaaatataaagttaaaaatgaggataatggcatgaaggcatcaga 479
|||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 283 ttcagtcaaatatgtgaaatataaagttaaaaatgaggataacgacatgaaggcatcaga 224
Query: 480 tttgggatggaagaaactttcag 502
|||||||||||||||||||||||
Sbjct: 223 tttgggatggaagaaactttcag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 502
Length of database: 903
Length adjustment: 10
Effective length of query: 492
Effective length of database: 893
Effective search space: 439356
Effective search space used: 439356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
