Query= MSMg01no117_c10.b1 MSMg01no117_c10.b1 CHROMAT_FILE:
MSMg01no117_c10.b1 PHD_FILE: MSMg01no117_c10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:23:36 2005
(511 letters)
>mm_chr7_37875270_37876180
Length = 911
Score = 936 bits (484), Expect = 0.0
Identities = 502/512 (98%), Gaps = 9/512 (1%)
Strand = Plus / Plus
Query: 5 gaattccacaaaatgcc-tatcacagatctgctccttccaggacagaatccaggtttggg 63
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattccacaaaatggcatatcacagatctgctccttccaggacagaatccaggtttggg 263
Query: 64 ggtggctgttgctgtgagctgcttctaaagagagcaggttgacatggactctgacatgaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ggtggctgttgctgtgagctgcttctaaagagagcaggttgacatggactctgacatgaa 323
Query: 124 ctgggtgagtcgtttagacaagggtttttatcatacagacacacacacacacacacacac 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ctgggtgagtcgtttagacaagggtttttatcatacagacacacacacacacacacacac 383
Query: 184 acacacacacac----caagacttcttagttaaaaggagaatccaaaaagtacttcataa 239
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 acacacacacacacaccaagacttcttagttaaaaggagaatccaaaaagtacttcataa 443
Query: 240 gcaggaatgaaaaataattttcttaaataaataaatacatgaatgaatgaatgaatgaat 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gcaggaatgaaaaataattttcttaaataaataaatacatgaatgaatgaatgaatgaat 503
Query: 300 gaatgaatgaatgaatgaatgaatgagtggggttttctctttaagtagatactcataggt 359
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 504 gaatgaatgaatgaatgaatga----gtggggttttctctttaagtagatactcataggt 559
Query: 360 gtttgtcagtgatgaaaactaacacacccaacatccatcgagcagacacaattaaggctg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gtttgtcagtgatgaaaactaacacacccaacatccatcgagcagacacaattaaggctg 619
Query: 420 ttgaatgctatggtaaagaaatgagcaaagaccttccctagggtctttagatgtaggcga 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ttgaatgctatggtaaagaaatgagcaaagaccttccctagggtctttagatgtaggcga 679
Query: 480 gaaagatggggaaaggatgtaatcaaagaagg 511
||||||||||||||||||||||||||||||||
Sbjct: 680 gaaagatggggaaaggatgtaatcaaagaagg 711
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 56
Number of extensions: 18
Number of successful extensions: 18
Number of sequences better than 10.0: 1
Number of HSP's gapped: 11
Number of HSP's successfully gapped: 1
Length of query: 511
Length of database: 911
Length adjustment: 10
Effective length of query: 501
Effective length of database: 901
Effective search space: 451401
Effective search space used: 451401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no117_c10.g1 MSMg01no117_c10.g1 CHROMAT_FILE:
MSMg01no117_c10.g1 PHD_FILE: MSMg01no117_c10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:23:36 2005
(538 letters)
>mm_chr7_38057965_38058902
Length = 938
Score = 1025 bits (530), Expect = 0.0
Identities = 536/538 (99%)
Strand = Plus / Minus
Query: 1 attccattttctccccataacaagtcagtaggtgtttttcaaagtcagcagccttatggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 attccattttctccccataacaagtcagtaggtgtttttcaaagtcagcagccttatggt 679
Query: 61 ctttggttcagttatgggaaaaacctgtgttgcagcttctgctagtgttgtaagcatgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 ctttggttcagttatgggaaaaacctgtgttgcagcttctgctagtgttgtaagcatgaa 619
Query: 121 caagaaataccttgctgcgtggctacaaggatccaggatctaagcatctaagcctcggta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 caagaaataccttgctgcgtggctacaaggatccaggatctaagcatctaagcctcggta 559
Query: 181 cacagtcaactcatgtctacaacaggtagacctcagcagtgtggaagatccccagcccaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 cacagtcaactcatgtctacaacaggtagacctcagcagtgtggaagatccccagcccaa 499
Query: 241 acctactcagtatagggcagggcagacatgtttctgaacaagctcttaaaaccccttaca 300
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 acctactcagtacagggcagggcagacatgtttctgaacaagctcttaaaaccccttaca 439
Query: 301 agtgagctttgcactaaggggatagatacagcatgctggacacatagtactggctggtgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 agtgagctttgcactaaggggatagatacagcatgctggacacatagtactggctggtgg 379
Query: 361 atggatcaccatcacttcaaatggatgcatgctgccccaatctcaagtacactagcctca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 atggatcaccatcacttcaaatggatgcatgctgccccaatctcaagtacactagcctca 319
Query: 421 taaagaggggagaaggtcgaaaggtttcccaggctgagaccctgcaaggtctgataagag 480
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 tagagaggggagaaggtcgaaaggtttcccaggctgagaccctgcaaggtctgataagag 259
Query: 481 agggagcgattttaaaaatcaatggaatatttaatagagacctgagtacaatcctcaa 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 agggagcgattttaaaaatcaatggaatatttaatagagacctgagtacaatcctcaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 538
Length of database: 938
Length adjustment: 10
Effective length of query: 528
Effective length of database: 928
Effective search space: 489984
Effective search space used: 489984
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
