Query= MSMg01no117_h06.b1 MSMg01no117_h06.b1 CHROMAT_FILE:
MSMg01no117_h06.b1 PHD_FILE: MSMg01no117_h06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:24:01 2005
(657 letters)
>mm_chr7_140159691_140160747
Length = 1057
Score = 1239 bits (641), Expect = 0.0
Identities = 650/653 (99%)
Strand = Plus / Minus
Query: 5 gaattcatagatacttccgcaccatctcaccattagtctccagactgcttttaggagccc 64
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 857 gaattcatagatactttagcaccatctcaccattagtctccagactgcttttaggagccc 798
Query: 65 agtaactagaatgtcccctttgagccctgtgttcaaaagcccaaagaaatctattaatac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 agtaactagaatgtcccctttgagccctgtgttcaaaagcccaaagaaatctattaatac 738
Query: 125 cctaaaaaaatttaaccctggctcacagccatcttcttttatctggtcacatgccaccat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 cctaaaaaaatttaaccctggctcacagccatcttcttttatctggtcacatgccaccat 678
Query: 185 tgtcaactataccaattacaatgacatcctctgcaatgcaacaattctagtggatattac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 tgtcaactataccaattacaatgacatcctctgcaatgcaacaattctagtggatattac 618
Query: 245 aacaccaatacagtcacatttaggacaccacaaagatactgtattctagcccacgtttca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 aacaccaatacagtcacatttaggacaccacaaagatactgtattctagcccacgtttca 558
Query: 305 aaaatctgatccctctactcacaatgatcccttttcataacacatatctaatactcagca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 aaaatctgatccctctactcacaatgatcccttttcataacacatatctaatactcagca 498
Query: 365 gcctgcctactgttttcatcacagcatccactctttctgaatcccttccctcagtctacc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 gcctgcctactgttttcatcacagcatccactctttctgaatcccttccctcagtctacc 438
Query: 425 caaccttttcccctgatgttactgggatcttgaaaattaaatgtaatggctagccaaaaa 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 caaccttttcccctgatgttactgggatcttgaaaattaaatgtaatggctagccaaaaa 378
Query: 485 aattgagttttcatctaccttgcatatttttaaatctccatacagtatcctggacactgg 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 aattgagttttcatctaccttgcatatttttaaatctccatacagtatcctggacactgg 318
Query: 545 cacatttgaatatcaacttatatatttctataaagtatacccagaaaatgtacagtgaca 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 cacatttgaatatcaacttatatatttctataaagtatacccagaaaatgtacagtgaca 258
Query: 605 aaaacggaacccatctcgttatgaaaactaaagtctcctatctgaaaaataaa 657
||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 257 aaaacggaacccatctcattatgaaaactaaagtctcctatctgaaaaataaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1057
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1047
Effective search space: 677409
Effective search space used: 677409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no117_h06.g1 MSMg01no117_h06.g1 CHROMAT_FILE:
MSMg01no117_h06.g1 PHD_FILE: MSMg01no117_h06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:24:01 2005
(547 letters)
>mm_chr7_140054983_140055927
Length = 945
Score = 978 bits (506), Expect = 0.0
Identities = 537/548 (97%), Gaps = 4/548 (0%)
Strand = Plus / Plus
Query: 1 tcaaaaatgtcactacactaccgtcctggaccaccagaaacacttagtcggtatttctag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcaaaaatgtcactacactaccgtcctggaccaccagaaacacttagtcggtatttctag 260
Query: 61 tagtcatagtcatctgtgttgagtctgaggaaattcttgtcttttttccctgcagtgctg 120
||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 261 tagtc--agtcatctgtgttgagtctgagggaattcttgtcttttttccctgcagtgctg 318
Query: 121 ggaattcaaccactgacccacatggatccccagcccaagatttgtttttgcaaaggaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ggaattcaaccactgacccacatggatccccagcccaagatttgtttttgcaaaggaaat 378
Query: 181 ctgtatattagtcagatataaagactgctgagttgggtaattgggaagtttggaatactt 240
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ctgtatattagtcagatttaaagactgctgagttgggtaattgggaagtttggaatactt 438
Query: 241 catctcttgtggagatgctggcagtgctgtgggtggaacccagggcagcccatctcccag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 catctcttgtggagatgctggcagtgctgtgggtggaacccagggcagcccatctcccag 498
Query: 301 caaattctctgcacagcagacattccctcaaagtcaaatacaaaaattgaggccacaaag 360
|||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 499 caaattctctgcacagcaaacattccctcaaagtcaaatacagaaattgaggccacaaag 558
Query: 361 tatctttcttgccctctccactcacagatgtagactagcaactggaaatgtttttaaact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 tatctttcttgccctctccactcacagatgtagactagcaactggaaatgtttttaaact 618
Query: 421 gggagtgtgagtggctggatt-gatgaatgagcagagaatggagggttttgtagagtagg 479
||||||||| |||||||| || |||||||||||||||||||||||||||||||||| |||
Sbjct: 619 gggagtgtgtgtggctgg-ttcgatgaatgagcagagaatggagggttttgtagagcagg 677
Query: 480 gccttgtcgcagcagaatttatgcagttagtatctgatgtacagtaagtgttgggtgtgc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 gccttgtcgcagcagaatttatgcagttagtatctgatgtacagtaagtgttgggtgtgc 737
Query: 540 cgtaagtg 547
| ||||||
Sbjct: 738 cataagtg 745
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 547
Length of database: 945
Length adjustment: 10
Effective length of query: 537
Effective length of database: 935
Effective search space: 502095
Effective search space used: 502095
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
