Query= MSMg01no117_k16.b1 MSMg01no117_k16.b1 CHROMAT_FILE:
MSMg01no117_k16.b1 PHD_FILE: MSMg01no117_k16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:24:17 2005
(525 letters)
>mm_chr7_111082411_111083335
Length = 925
Score = 600 bits (310), Expect = e-175
Identities = 338/348 (97%), Gaps = 3/348 (0%)
Strand = Plus / Minus
Query: 1 gatcttgcaaacacaaaacaacattgaggatctttccaaaacttagcctgggtgcctcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 gatcttgcaaacacaaaacaacattgaggatctttccaaaacttagcctgggtgcctcag 288
Query: 61 ttattttcagtagaaatgtagtagtggcctggaagtcccacaggtgatgcgtcagtgaat 120
|||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||
Sbjct: 287 ttattttcagtagaaatgtagtagtggcctggaattcccacaggtgatgcttcagtgaat 228
Query: 121 caggtggtccttcactctcctct--cacagctgccatcttttttgtttttaattaggtat 178
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 227 caggtggtccttcactctcctctcacacagctgccatcttttttgtttttaattaggtat 168
Query: 179 ttatttcatttacatttccaatgctatcccaaaagtccccccccacgctcccctacccac 238
|||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||
Sbjct: 167 ttatttcatttacatttccaatgctatcccaaaagt-cccccccacactcccctacccac 109
Query: 239 tcccccacccacccactctcacttcttggccctagcattcccctgtactgaggcagataa 298
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 tcccccacccacccactcccacttcttggccctagcattcccctgtactgaggcagataa 49
Query: 299 agtttgcacaaccaatgggcctctctttccagtgatggcggattaggc 346
||||||||||||||||||||||||||||||| ||||||| || |||||
Sbjct: 48 agtttgcacaaccaatgggcctctctttccactgatggccgactaggc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 525
Length of database: 925
Length adjustment: 10
Effective length of query: 515
Effective length of database: 915
Effective search space: 471225
Effective search space used: 471225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no117_k16.g1 MSMg01no117_k16.g1 CHROMAT_FILE:
MSMg01no117_k16.g1 PHD_FILE: MSMg01no117_k16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:24:18 2005
(543 letters)
>mm_chr7_111011629_111012570
Length = 942
Score = 497 bits (257), Expect = e-145
Identities = 301/317 (94%), Gaps = 7/317 (2%)
Strand = Plus / Plus
Query: 231 agagtatccttttttattctaggtattttca-tatgtctttaaattttcttctcttatat 289
||||||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||
Sbjct: 429 agagtatccttttttattctaggcattttcagcatgtctttaaattttcttctcatatat 488
Query: 290 tcctatgagatacagtcatgactaaagaagtagaaagtacaagtatatcttagactctat 349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 tcctatgagatacagtcatgactaaagaagtagaaagtacaagtatatcttagactctat 548
Query: 350 tttt-atatatttaaattttaagatgatatttcattaatttttgaggatttcctacagca 408
|||| |||||||||| |||||||||||||||||||| |||||||||||||||| | ||
Sbjct: 549 tttttatatatttaatttttaagatgatatttcatt---ttttgaggatttcctatatca 605
Query: 409 tattttgatcatattcaaccctctctc-tctataaggccctcccagatctgtttctacct 467
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 606 tattttgatcatattcaaccctctctcctctataaggccctcccagatctgtttctacct 665
Query: 468 cttcactcctcctaaatttaatatcctgttctatattt-attgaatctttttaataactt 526
|||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||
Sbjct: 666 cttcactcctcctaaatttagtatcctgttctatattgcattgaatctttttaataactt 725
Query: 527 cattaatccaattcagt 543
||||||||||||||||
Sbjct: 726 tattaatccaattcagt 742
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 543
Length of database: 942
Length adjustment: 10
Effective length of query: 533
Effective length of database: 932
Effective search space: 496756
Effective search space used: 496756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
