Query= MSMg01no118_l24.b1 MSMg01no118_l24.b1 CHROMAT_FILE:
MSMg01no118_l24.b1 PHD_FILE: MSMg01no118_l24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:25:42 2005
(323 letters)
>mm_chr7_108110881_108111604
Length = 724
Score = 543 bits (281), Expect = e-159
Identities = 314/329 (95%), Gaps = 8/329 (2%)
Strand = Plus / Plus
Query: 2 gaattccatgaattctgacctaggcacttctcctcacagacttccatctccctgtctgta 61
|||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||
Sbjct: 195 gaattccatgaattctgagataggcacttctcctcacagacctccatctccctgtctgta 254
Query: 62 aaatggaatactagtagcatctccagaagacattggaatgtcacaaagagtcaatgggac 121
||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 255 aaatggaatactagtagcatctccagaagacattggaatatcacaaagattcaatgggac 314
Query: 122 aactgaggctcccagccagctctgagactcagagggagggtggtggcataaaggagccag 181
|||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 315 aactgaggttcccagccagctctgagactcagagggagggtggtggcatagaggagccag 374
Query: 182 gcagattctcagcactgaagacagtcctatagggaccccca-------gtgaagtctgta 234
||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 375 gcagattctcagcactgaagacagtcctatagggacccccaccccccagtgaagtctgta 434
Query: 235 ggaacagttccagggtgaggcaagaggacaggctagagataatagttagtgttagtttct 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 ggaacagttccagggtgaggcaagaggacaggctagagataatagttagtgttagtttct 494
Query: 295 agactatgacccccca-ctcttcctggta 322
|||||||||||||||| ||||||||||||
Sbjct: 495 agactatgaccccccaactcttcctggta 523
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 724
Length adjustment: 9
Effective length of query: 314
Effective length of database: 715
Effective search space: 224510
Effective search space used: 224510
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no118_l24.g1 MSMg01no118_l24.g1 CHROMAT_FILE:
MSMg01no118_l24.g1 PHD_FILE: MSMg01no118_l24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:25:42 2005
(133 letters)
>mm_chr7_108279420_108279951
Length = 532
Score = 240 bits (124), Expect = 3e-68
Identities = 131/134 (97%), Gaps = 3/134 (2%)
Strand = Plus / Minus
Query: 1 ttcaaccctgctcat-aaaaaatactactatacagttggacaacagtaaccactgtgggc 59
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 ttcaaccctgctcataaaaaaatactactatacagttggacaacagtaaccactgtgggc 273
Query: 60 taccaatatctgatatcctaagaaatgttttgggaggaaaatcaccatattaaaaaaaaa 119
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 272 taccaatatctgatatcctaagaaatgttttgggaggaaaatcaccatatt--aaaaaaa 215
Query: 120 aaagaggaaggaaa 133
||||||||||||||
Sbjct: 214 aaagaggaaggaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 133
Length of database: 532
Length adjustment: 8
Effective length of query: 125
Effective length of database: 524
Effective search space: 65500
Effective search space used: 65500
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
