Query= MSMg01no118_m08.b1 MSMg01no118_m08.b1 CHROMAT_FILE:
MSMg01no118_m08.b1 PHD_FILE: MSMg01no118_m08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:25:43 2005
(456 letters)
>mm_chr7_108280539_108281394
Length = 856
Score = 835 bits (432), Expect = 0.0
Identities = 450/456 (98%)
Strand = Plus / Minus
Query: 1 ctagctttaaactcataggctcagactttcccacagtagattgaactatagacataactg 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 494 ctagctttaaactcataggctcagactttcccaaagtagattgaactatagacataactg 435
Query: 61 ccatattgaacctcaaagtttcaatttgtaagataaacaaaacaaacaacaacctactct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 ccatattgaacctcaaagtttcaatttgtaagataaacaaaacaaacaacaacctactct 375
Query: 121 gaagcacaaagtacaaaaaaagtatgccagcataaagaatgagctatgaaccttgctttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 gaagcacaaagtacaaaaaaagtatgccagcataaagaatgagctatgaaccttgctttg 315
Query: 181 aaaggattcaccaaccaaaggcctacaaatgctagagacaagtaggaactacttgtctta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 aaaggattcaccaaccaaaggcctacaaatgctagagacaagtaggaactacttgtctta 255
Query: 241 gatctccttaattttcctgactatattttagtttcttatcaatgaaatgtgaggataaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 gatctccttaattttcctgactatattttagtttcttatcaatgaaatgtgaggataaag 195
Query: 301 ctgtgttttgcctcatgtctacaatcccagcactgaggaggctacaaaagcatcttaagt 360
|||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 194 ctgtgttttggttcatgtctacaatcccagcactgaggaggctacaaaagtatcttaagt 135
Query: 361 ttaaagcttacctatgctacatagagatttccaggtctgtctaggttacataaagagagg 420
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 134 ttaaagcttacctatgctacatagagatttccagatctgtctaggttacataaagagagg 75
Query: 421 gttgggggagtagagcaaatgcatactaccatgaga 456
||||||||||||||||||||| ||||||||||||||
Sbjct: 74 gttgggggagtagagcaaatgtatactaccatgaga 39
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 456
Length of database: 856
Length adjustment: 10
Effective length of query: 446
Effective length of database: 846
Effective search space: 377316
Effective search space used: 377316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no118_m08.g1 MSMg01no118_m08.g1 CHROMAT_FILE:
MSMg01no118_m08.g1 PHD_FILE: MSMg01no118_m08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:25:43 2005
(406 letters)
>mm_chr7_108149275_108150079
Length = 805
Score = 696 bits (360), Expect = 0.0
Identities = 396/410 (96%), Gaps = 5/410 (1%)
Strand = Plus / Plus
Query: 1 caccctgtggccactaagagctctttcagaccagggtgaggaggcccacatctgccatcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 caccctgtggccactaagagctctttcagaccagggtgaggaggcccacatctgccatcc 256
Query: 61 tagcactcgggaggctgaggcaggagtagaaggagtttgaagccagcctggctacctaga 120
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 tagcactcgggaggctgagacaggagtagaaggagtttgaagccagcctggctacctaga 316
Query: 121 aagactgtctcagaacagtgaggggcaggtgaaatgactcagctggtaaaggcgcctgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 aagactgtctcagaacagtgaggggcaggtgaaatgactcagctggtaaaggcgcctgct 376
Query: 181 gccaagactaatgacctgaggccaaggaccccacattggtagaaggagtgactctcccaa 240
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 377 gccaagactaatgacctgaggccaaggaccctacattggtagaaggagtgactctcccaa 436
Query: 241 gaggtcctctgaccgttacataggcactgtggcacatgtgcaccgcagacatatacacaa 300
| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 437 gtggtcctctgaccgttacataggcactgtggcacatgtgcaccacagacatatacgcaa 496
Query: 301 aacaa----gcaacagacatgaagtatgtgcatgagtaagaaaatgacaagtcttcttgg 356
||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 497 aacaaataagcaacagacatgaagtatgtgcatgaataagaaaatgacaagtctttttgg 556
Query: 357 gctggagtagaaaagttttacccaaaggggcccaaggcaagaacttgacc 406
||| ||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct: 557 gctagagtataaaagttttacccaaaggggcccaaggcaaga-cttgacc 605
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 406
Length of database: 805
Length adjustment: 9
Effective length of query: 397
Effective length of database: 796
Effective search space: 316012
Effective search space used: 316012
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
