Query= MSMg01no118_o10.b1 MSMg01no118_o10.b1 CHROMAT_FILE:
MSMg01no118_o10.b1 PHD_FILE: MSMg01no118_o10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:25:53 2005
(523 letters)
>mm_chr7_137519060_137519981
Length = 922
Score = 932 bits (482), Expect = 0.0
Identities = 512/526 (97%), Gaps = 10/526 (1%)
Strand = Plus / Plus
Query: 5 gaattctttcttcatctctcg-agctctgagcccctgtgcctagtgaacaatagttcaag 63
||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctttcttcatct-t-gcagctctgagcccctgtgcctagtgaacaatagttcaag 262
Query: 64 tggaccactgtgctcccatcttgtagggaccctagacagctcagaaaggtctaggtgctt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tggaccactgtgctcccatcttgtagggaccctagacagctcagaaaggtctaggtgctt 322
Query: 124 tgtcacatgtctggtgcatttcactcaccataatgtccacaggggaacactcattataga 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tgtcacatgtctggtgcatttcactcaccataatgtccacaggggaacactcattataga 382
Query: 184 atgcttcagaacgcctttcttgtcaagactgcataagatgccctccgtggatacaccaca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 atgcttcagaacgcctttcttgtcaagactgcataagatgccctccgtggatacaccaca 442
Query: 244 ttggctcacccatctgtcatggtcacgtccgcagttactccctggctatggagaacagca 303
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 443 ttggctcacccatctgtcatggtcacgtccgcagttactccctggctatcgagaacagca 502
Query: 304 ctgtcgtgaacatgtgattcttccagacgcttctttgattcttccggtcatattcacagt 363
||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 503 ctgtcatgaacatgtgattcttccagacgcgtctttgattcttccggtcatattcacagt 562
Query: 364 agagttgcctggcctcatggtaattcctcttctaactttgtgaggaatagccagccagag 423
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 563 agagttgcctggcctcatggtaatccctcttctaactttgtgaggaatagccagccagag 622
Query: 424 tgttccacaggctctacactattccccacacccatctgcagtgcacagcttccttaaaaa 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 tgttccacaggctctacactattccccacacccatctgcagtgcacagcttccttaaaaa 682
Query: 484 aaaaaaaaaaa-------ctattttctgtttgttgttgttgttgtt 522
||||||||||| ||||||||||||||||||||||||||||
Sbjct: 683 aaaaaaaaaaaaaaacaactattttctgtttgttgttgttgttgtt 728
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 523
Length of database: 922
Length adjustment: 10
Effective length of query: 513
Effective length of database: 912
Effective search space: 467856
Effective search space used: 467856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no118_o10.g1 MSMg01no118_o10.g1 CHROMAT_FILE:
MSMg01no118_o10.g1 PHD_FILE: MSMg01no118_o10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:25:53 2005
(527 letters)
>mm_chr7_137642039_137642965
Length = 927
Score = 1004 bits (519), Expect = 0.0
Identities = 525/527 (99%)
Strand = Plus / Minus
Query: 1 ttgagaaatggattagtagggctggatgcagtgatacactactttaatcccagaggctgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 ttgagaaatggattagtagggctggatgcagtgatacactactttaatcccagaggctgg 567
Query: 61 tgggtttctgtgtgttcaaagccagcctggggaacataatgagttccaggatagccaact 120
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 566 tgggtttctgtgtgttcaaagctagcctggggaacataatgagttccaggatagccaact 507
Query: 121 ctatgtagagagaccctgtctgaaaaacaacaaaacaaaataaaaagccaaaaataccaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 ctatgtagagagaccctgtctgaaaaacaacaaaacaaaataaaaagccaaaaataccaa 447
Query: 181 ccaaccaaccaaaatgaaactgattactctggcttagcagttccttctccattcttgtca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 ccaaccaaccaaaatgaaactgattactctggcttagcagttccttctccattcttgtca 387
Query: 241 tcactagtactttctggtttgttttcaaatatttattttctacattaaattgtgtgcatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 tcactagtactttctggtttgttttcaaatatttattttctacattaaattgtgtgcatg 327
Query: 301 tgaggaggagtatgtacgtgtcatttcaggtgcctgcagaggacagaggagttggatctc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 tgaggaggagtatgtacgtgtcatttcaggtgcctgcagaggacagaggagttggatctc 267
Query: 361 cctggagctggtgttacaggcagttgtcagctgcatgatgtggttgctagggactgaatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 cctggagctggtgttacaggcagttgtcagctgcatgatgtggttgctagggactgaatt 207
Query: 421 tcattcctttgcaagagcagcaagtattcttaacaactgccatctttccagctctggacc 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 206 tcattcctttgcaagagcagcaagtattcttaacaactgccatctttccagctctggatc 147
Query: 481 tacaattagcttgttttagtgtgaatgggagtattaggtttttttgt 527
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 tacaattagcttgttttagtgtgaatgggagtattaggtttttttgt 100
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 527
Length of database: 927
Length adjustment: 10
Effective length of query: 517
Effective length of database: 917
Effective search space: 474089
Effective search space used: 474089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
